Gene Tbd_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2503 
Symbol 
ID3671822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2575068 
End bp2576477 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content63% 
IMG OID637711209 
ProductL-glutamine synthetase 
Protein accessionYP_316261 
Protein GI74318521 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGG CCGATGTGCT CAAGAGAATT CAGGACGACG AAGTGAAGTT CGTCGACCTG 
CGCTTCACCG ATACGCGTGG CAAGGAACAG CACGTTTCGA TTCCTGCCCG CATCGTGACC
GAGGACTGGT TCGAGGACGG CCATCCCTTC GACGGCTCCT CGATCGCCGG TTGGAAAGGC
ATCCAGGCGT CCGACATGCT GCTCAAGGCC GATCCCGACT CGGCCTACAT GGATCCCTTC
TTCGACGAGC CCACGCTGAT CCTGACCTGC GACGTGATCG AGCCGTCCGA CGGCAAGGGC
TACGAGCGCG ATCCGCGTTC GGTCGCGCGT CGCGCCGAGG CCTACCTCAA GTCGACGGGG
CTGGCCGATA CGGCTTACTT CGGACCCGAG CCCGAGTTCT TCATTTTCGA TTCGATCACC
TGGCACGACG ACATGTCGGG CTCGGGCGTG AAGATCAATT CGGAGGAGGC CGCCTGGTCG
TCCGCCGAGA AGTTCGAGAA CGGCAACACC GGCCACCGTC CGGGCATCAA GGGCGGCTAC
TTCCCGGTGC CGCCGGTCGA CAGCCTGCAG GACATCCGCG CTGCGATGGT CGTTGCGCTG
GAAGAAGCCG GCGTTCCGGT CGAAGTCTTC CACCACGAAG TCGCGACCGC GGGCCAGTGC
GAGATCGGGA CCCAGTTCAG CACGCTGACC AAGCGCGCCG ACTGGACGCA GGTTCTCAAG
TACATCGTGC ACAACGTCGC CCACGCCTAC GGCAAGACGG CGACCTTCAT GCCCAAGCCC
ATCGTCGGCG ACAACGGTTC CGGCATGCAC GTGCACATGT CGCTGTGGAA GGACGGCAAG
AACACCTTCG CCGGCAACGG CTACGCCGGG CTGTCCGAGA CCGCGCTCTA TTACATCGGC
GGCATCATCA AGCACGCCAA GGCACTGAAC GCGATCACCA ATCCGGGCAC CAACTCGTAT
AAGCGTCTGG TGCCGGGCTT CGAAGCGCCG GTCATGCTGG CCTACTCGGC CCGCAACCGC
TCGGCGTCGA TTCGCATTCC GATCGCTGCG AGCGAGAAGG CACGCCGCAT CGAGGTTCGT
TTCCCGGACC CGCTGGCCAA CCCCTATCTG GCGTTCTCCG CGCTGATGAT GGCGGGCCTC
GACGGCATCC AGAACAAGAT CCACCCCGGC GACCCCGGCG ATAAGGACTT GTACGACCTG
CCGCCCGAAG AGGATGCGAA GATTCCGAAG GTCTGCCACA GCCTCGAAAT GGCACTCGAC
GAGCTCGACA AGGACCGCGA GTTCCTGACT CGTGGCGGCG TGTTCACGAA CGACATGATC
GATGCCTACA TCACGCTGAA GATGGAAGAG GTCACGAAGT TCCGCATGAC CACGCACCCG
GTCGAGTTCG CGATGTACTA CTCGCTGTAA
 
Protein sequence
MAVADVLKRI QDDEVKFVDL RFTDTRGKEQ HVSIPARIVT EDWFEDGHPF DGSSIAGWKG 
IQASDMLLKA DPDSAYMDPF FDEPTLILTC DVIEPSDGKG YERDPRSVAR RAEAYLKSTG
LADTAYFGPE PEFFIFDSIT WHDDMSGSGV KINSEEAAWS SAEKFENGNT GHRPGIKGGY
FPVPPVDSLQ DIRAAMVVAL EEAGVPVEVF HHEVATAGQC EIGTQFSTLT KRADWTQVLK
YIVHNVAHAY GKTATFMPKP IVGDNGSGMH VHMSLWKDGK NTFAGNGYAG LSETALYYIG
GIIKHAKALN AITNPGTNSY KRLVPGFEAP VMLAYSARNR SASIRIPIAA SEKARRIEVR
FPDPLANPYL AFSALMMAGL DGIQNKIHPG DPGDKDLYDL PPEEDAKIPK VCHSLEMALD
ELDKDREFLT RGGVFTNDMI DAYITLKMEE VTKFRMTTHP VEFAMYYSL