| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2462 |
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| Symbol | |
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| ID | 3671781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2532867 |
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| End bp | 2536154 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711168 |
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| Product | transmembrane protein |
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| Protein accession | YP_316220 |
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| Protein GI | 74318480 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA TCCCGCGCCG CATTCTCGCC GCGCTCGGCA TACTGCTCCT GCTGCTGCTC
GTCGCCGCGC TCGTCGCCTA CGAACTCGTG TCGTCGGCGG TCGAAGCGCG CTACCTCGTC
AAGACGGCGC AGAAGATGAC CTGGCGGGTC GAGCCGGGGC CGTCGGAACG CATCCGCTAC
CCGGGCGACG GTCCCTACGA CGTGCGCCTC GGCTACAGCA AACTGCCGCA GTACCTGCCG
CGGCTCGAAG CCGCCGGCTG GCAGGTCGAC GCCCAGGCCA AGATCAGCGT ACAGATGGCG
CGGGCGAAGG ATCTCGGCCT CTTCCTGCCC TATCACGAGA AGGATCAGGC TGGCCTGATG
CTGCGCGACA GCGACGGCAA GCGACTCTAT CAGGGCAAGC ACCCGACGCG GGTGTACGCG
CGCTTCGAGG ACATCCCGCC GATCCTCGTC AATGCGCTGC TGCACATCGA GAATCGCGAA
CTCTTGACCG AGCAGTTCCC GACCCGCAAC CCGGCCGTCG AATGGGATCG CCTCGCCCAG
GCCCTGCTCG AGAAAGGCAT CAGCCTGATC GATCCGGGCC GCAACGTGCC GGGGGGCAGC
ACACTGCCCA CACAGATCGA GAAGTATCGC CATTCCCCCG AGGGAATGAC CTCGAGCATG
GGCGAGAAAC TGCGGCAGAT GGGGACGGCG AGCGTGCGCG CCTACCTCGA CGGGCCGAAC
ACGCTGCCGA TGCGCAAGAA GACGGTCATG GCCTACCTCA ATACCGTCCC GCTCGCGGCG
GCGCCGGGAT TCGGCGAGGT CAGCGGGGTC GGCGACGGGC TCTGGGCGTG GTACGGCCTC
GACTTCGCCA CGATCAATCG CACGCTCAAA CAAGGCCCCG CGGCCAGGAA CGGGCGCGCG
AAAAAAAATG CCGCCACGGA TGCCGCCTAC GCGAGCGCGC TCAAGCACGT GCTCTCGCTC
GTCGTCGCCG AACGGCGGCC CTCGTATTAC CTCGCCGCCA ACCGCAAGGC GCTTGACGCT
GCGACCGACG ATCACCTCGA ACTCCTCGTC GGCGCCGGCC TGATCCCGCG CCCGCTCGCC
GAGCGCGCCA AGGCGGTCAA ACTGCGCAGC ACGCGCCAGC GGATCGACCC GCCCGCGCCG
CGCTTCGTCG ACCAGAAAGC GACCAACGCG CAACGCATCC GGGTCGCGCA ACTGCTCGGC
GAAGAACGGC TGTACGACCT CGACCGGCTC GATCTCACGG TCGACACGAC GATCAACCAG
CCGGCGCAGA AAGTCGTCAG CGGCTATCTG CAAAGCCTGG CGCGACCGAG CGCCGCGGCG
GCCGCGGGTC TGATGGGCCA TCGCCTGCTG CGCCCGGAAA ATCCGATCGA GAACGTGATC
TACAGTTTCA CGCTGTACGA AAAAGCGCCG ACAGGAAACC TGCTGCGCAT CCAGGCCGAC
AATCTCAACC AGCCCTTCGA CATCAACAGC CAGGCGCGTC TCGACCTCGG CTCGACCGCC
AAGCTGCGCA CGCTCGTCAC CTATCTCGAA ATCGTCGCGC GGCTGCACGA CGCTTACCGC
TCGCTCGAGC GGCCGGCGCT CGTGGCCAAG GCGCGACCGC AGCGCGACGC CCTGTCGCAA
TGGGTCGCCG CGCGGCTGCT GGCCAATCGC GAGGAAGCGC TCGCGGTCAC CCTCGATGCG
GCGATGGCCC GCTCCTACTC CGCGTCGCCC GAGACCTTCT TCACCGGAGG CGGCCTGCAC
AACTTCGCCA ACTTCGACCC CAAGGACAAC AGCCGCGTGA TGGATGTGTG GGAGGCGACG
CGCAACTCGG TCAACCTCGT CTACATCCGC ATCATGCGCG ACATCGTGCG GCACTACGCG
AGCGCCTCGC CCGGCGCCGC CGCGCGCATC CTCGACGACG CCAGCAACCC GATGCGCAAC
ACCTACCTGA TGCGCTTCGT CGACCAGGAG GGGCGCGTCT TCATCAACCG CTTCTACCAG
CGCCACAAGC GCCAGACCGC GGCCGAAATG GCCGACGACC TCTACGACCG CGTCGACGGC
AACCCGCGCC GCTTCACCTC GGCCTTCCGC TACCTGAATC CGCAGGCGAA CTTCGCCGCC
TACGCCGCGG AACTGAAAAA GCAGCTGCCG GCCGCGACGA TACCGAACGA GAAGACGCTC
GAGGCGCTCT ACGAAGCGCA TGCGCCCGAA GCCTACAACC TCGCCGACCG CGGCTACGTC
ACGCAGATCC ACCCGCTCGA GCTGTGGGTC GTGAAAACGC TGCGCAGCGC GCCGGCGACC
GACCTCGAGG CCTTGTACGA ACAAGGCGCG GCGGCGCGCC GCGAAGTCTA CAACTGGCTG
TTCAAGACCA GCCGCAAGAA CGCGCAGGAC ATCCGCATCC AGTCCCTGCT CGAAGTCGAA
GCCTTCGACG GCCTGCTGAA CGACTGGAAG CGTCTCGGCT ACCCCTTCGA CAACATCACG
CCGTCGTACG CGACCGCGAT CGGCAGTTCC GGCGACCGCC CCGCCGCGCT CGCCGAACTG
ATGGGCATTC TCCTCAACGA CGGCGTGCGC GCCGGCAGCG TGAGCGTCAC CGGCCTGCAT
TTCGCCGCCG ACACGCCCTA TGAGACCCGG CTGTCGCGCC GCGCGACCGC GCGCGAGCGG
CTGCTGCCGG CCGAGGTCGC GCGCACCGTG CGCCGTGCAT TGGCGCTCGT CGTCGAAGGC
GGAACGGCGG CACGGCTCGC CGGCGCGCTC AAGACAGCCG ACGGCAAGCC GCTGACCATC
GGCGGCAAGA CCGGCACCGG CGACCACCGC TTCGAGCGTT TCGGCCGCGG CGGCGAACTG
CTCGAATCAC GCGTCGTCAA CCGCACCGCC ACCTTCGCCT TCTATCTCGG CGACCGTTAT
TTCGGCACGC TGACCGCGCT CGTTCCGGGC GAGCAGGCCG GGCAATTCGG CTTCACCAGC
TCGCTCACCG CGCAAATCCT CAAGAACCTG CTGCCGCAGC TGCAGCCCCA TCTCTACCCG
CTGGCGCCGG CGCCGAAGCA GGAAGCCGGG CCCCCGGCGG AAGCGCCGGC CGTGCCCGCT
GCACCGGCGA CGCCCGAAGC GCCTGCCCCC GCGCCGCTAC CCGCGCCAGT GCCGGCCGAG
CCCACCAAGC CGCGCGCGCC GGTGACGGAA AAACCGGACG GCGCGACGAG CCAAGCCGAT
CCGCCGGCCA AGGAACCGAA GGCCGAGGGT GGCTTCCCCG AGGACCTCGA ACCGAGCGTC
GTCGTCCCCG TCCCGGCCAC GCCGGCGGCG CCGACGCCGG CGCCCTGA
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| Protein sequence | MRKIPRRILA ALGILLLLLL VAALVAYELV SSAVEARYLV KTAQKMTWRV EPGPSERIRY
PGDGPYDVRL GYSKLPQYLP RLEAAGWQVD AQAKISVQMA RAKDLGLFLP YHEKDQAGLM
LRDSDGKRLY QGKHPTRVYA RFEDIPPILV NALLHIENRE LLTEQFPTRN PAVEWDRLAQ
ALLEKGISLI DPGRNVPGGS TLPTQIEKYR HSPEGMTSSM GEKLRQMGTA SVRAYLDGPN
TLPMRKKTVM AYLNTVPLAA APGFGEVSGV GDGLWAWYGL DFATINRTLK QGPAARNGRA
KKNAATDAAY ASALKHVLSL VVAERRPSYY LAANRKALDA ATDDHLELLV GAGLIPRPLA
ERAKAVKLRS TRQRIDPPAP RFVDQKATNA QRIRVAQLLG EERLYDLDRL DLTVDTTINQ
PAQKVVSGYL QSLARPSAAA AAGLMGHRLL RPENPIENVI YSFTLYEKAP TGNLLRIQAD
NLNQPFDINS QARLDLGSTA KLRTLVTYLE IVARLHDAYR SLERPALVAK ARPQRDALSQ
WVAARLLANR EEALAVTLDA AMARSYSASP ETFFTGGGLH NFANFDPKDN SRVMDVWEAT
RNSVNLVYIR IMRDIVRHYA SASPGAAARI LDDASNPMRN TYLMRFVDQE GRVFINRFYQ
RHKRQTAAEM ADDLYDRVDG NPRRFTSAFR YLNPQANFAA YAAELKKQLP AATIPNEKTL
EALYEAHAPE AYNLADRGYV TQIHPLELWV VKTLRSAPAT DLEALYEQGA AARREVYNWL
FKTSRKNAQD IRIQSLLEVE AFDGLLNDWK RLGYPFDNIT PSYATAIGSS GDRPAALAEL
MGILLNDGVR AGSVSVTGLH FAADTPYETR LSRRATARER LLPAEVARTV RRALALVVEG
GTAARLAGAL KTADGKPLTI GGKTGTGDHR FERFGRGGEL LESRVVNRTA TFAFYLGDRY
FGTLTALVPG EQAGQFGFTS SLTAQILKNL LPQLQPHLYP LAPAPKQEAG PPAEAPAVPA
APATPEAPAP APLPAPVPAE PTKPRAPVTE KPDGATSQAD PPAKEPKAEG GFPEDLEPSV
VVPVPATPAA PTPAP
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