Gene Tbd_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2461 
Symbol 
ID3671780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2531953 
End bp2532864 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID637711167 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_316219 
Protein GI74318479 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA CCGCCTGCGA TCCCTCCGCC GTCAAAACCT GGCTGCTCGA CCTGCAGTCG 
CGCATCGTCG CCGCGCTCGA AGCCGCCGAC GGCCTGCCCT TCCGTACCGA TTCCTGGGAT
CGCCCGGAGG GCGGCGGCGG GATTTCGCGG CTGATCGAGG AAGGCAACGT GCTCGAGCGC
GGCGGCGTCA ATTTCTCGCA CGTCACCGGC GTCCAGCTGC CGCCTTCGGC CAGCGCGCAC
CGCCCCGAAC TCGCCGGGCG CCGCTGGGAG GCAATGGGCG TCTCGCTGGT CTTGCACCCG
CGCAACCCCT ACGTGCCGAC GGTCCACATG AACGTGCGCT GCTTCTCCGC GCTCAAGGAC
GGTGAAGCAC CGGTATGGTG GTTCGGCGGC GGCATGGACC TGACCCCGTA TTACGGCTTC
GAACAGGATG CCCGCCACTT CCACCTCGCC TGCAAGAGCG CGCTCGATCC GTTCGGGCCC
GGGCTGCATG CGCGCTTCAA GGACTGGTGC GACCGTTACT TCTTCCTCAA ACATCGCAAC
GAGGCGCGCG GGGTGGGCGG CATCTTCTTC GACGACTTTT CCGAAGGCGG TTTCGATCAC
GCCTTCGCGA TGACGCGGAG CGTCGGCGAC GCCTTCATCG ACGCCTACCT GCCGATCCTG
GAACGCCGCA AGGACATCGC CTACGGCGAG CGCGAACGCG ATTTCCAGGC CTACCGCCGC
GGCCGCTACG TCGAATTCAA TCTCGTGCTC GACCGCGGCA CCCTGTTCGG CCTGCAGTCG
GGCGGGCGCA CCGAGTCGAT CCTGATGTCG CTGCCGCCGC TCGTGAAGTG GCGCTACGAC
TGGCAGCCCG CGCCCGGCAC GCCCGAGGCC GAGCTTTACA CCGCGTTCCT GCCGGCGTGC
GACTGGGTCT GA
 
Protein sequence
MSVTACDPSA VKTWLLDLQS RIVAALEAAD GLPFRTDSWD RPEGGGGISR LIEEGNVLER 
GGVNFSHVTG VQLPPSASAH RPELAGRRWE AMGVSLVLHP RNPYVPTVHM NVRCFSALKD
GEAPVWWFGG GMDLTPYYGF EQDARHFHLA CKSALDPFGP GLHARFKDWC DRYFFLKHRN
EARGVGGIFF DDFSEGGFDH AFAMTRSVGD AFIDAYLPIL ERRKDIAYGE RERDFQAYRR
GRYVEFNLVL DRGTLFGLQS GGRTESILMS LPPLVKWRYD WQPAPGTPEA ELYTAFLPAC
DWV