Gene Tbd_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2443 
Symbol 
ID3673953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2512184 
End bp2513218 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID637711149 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_316201 
Protein GI74318461 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGTCA CGAGCGACCG TCTGCCGGAG CAGCTTGCGC GCGGCCTCGC CCCGCTCTAC 
GTGCTGGTCG GCGACGAGCC GCTGGCGGCG CAGGAAGCGG GCGACGCGAT CCGCGCTGCC
GCGCGAGCGG CCGGCTATAG CGAGCGCACG GTCCACACCG CGCAGGGGCG CTACAACTGG
CAGGGCATTT TCGCCGGCGC CGACAATCTT TCGCTGTTCG CCGAACGTCG GCTCACCGAA
ATCCGCATTC CCTCGGGCAA GCCCGGCGTC GACGGCGCCA AGGCGCTCGA GGCCTACGCG
GCGAAGCTGC CGGCCGACAC GCTGACGCTC GTCAGCCTGC CCGGGCTCGA CAGGAAAACC
CAGCAAAGCC GCTGGTTCAC CGCGCTGGCC AAAAGCGCCG TCGTCGTCGA GGCGCGCCCG
GTCGAGCGCG CGCAATTGCC GGCGTGGATC GACCGCCGGC TCGCCCGCCA GGGATTGCAC
GCCGAACGCG CGGCGCTCGA ATTCCTCGCC GACCAGGTCG AGGGAAATCT CCTGGCCGCG
CAGCAGGAGA TCGACAAGCT CGCCCTGCTG TTGCCGCCCG GCGCCGTGAC GCTTGCCGAT
GTCGAGCATG CCGTGGTCGA CGTCAGTCGC CTCGAGGCGG ACGCGCTGCA GGATGCGCTG
TACGCCGGCG ACGCCGCGCG CTTCGCGCAG GTGGCGAAGG ATCTTCAGGA CAGCGGCGAG
GCCGTGCCGG CCATCCTGTG GCAGGTGGCG TCGGCGGTGC AGTTGCTGCT CAGGCTAAAA
TTGGCCCAGT CGAACGGCGA AAGCCTGCCC GCGCTGATGC GGACGCTGTG GGGACGCGAC
AAGCAGCGCG CTCCGCAGAT CGAGCGCGCA CTCAAACGCC TGAGCATGAC GCAGATCGAG
GCCGCGCTGG GCGCGCTCGC AGGGGTCGAC CGCCAGGCGA AAGGCCTGGA CCGCATAGGC
GATCCGTGGG ACAGCCTGCT GCGCGCTGCG ATGACACTTG CCGGCGGTGA ACGCCGCGAA
AACAGGACAC GATGA
 
Protein sequence
MNVTSDRLPE QLARGLAPLY VLVGDEPLAA QEAGDAIRAA ARAAGYSERT VHTAQGRYNW 
QGIFAGADNL SLFAERRLTE IRIPSGKPGV DGAKALEAYA AKLPADTLTL VSLPGLDRKT
QQSRWFTALA KSAVVVEARP VERAQLPAWI DRRLARQGLH AERAALEFLA DQVEGNLLAA
QQEIDKLALL LPPGAVTLAD VEHAVVDVSR LEADALQDAL YAGDAARFAQ VAKDLQDSGE
AVPAILWQVA SAVQLLLRLK LAQSNGESLP ALMRTLWGRD KQRAPQIERA LKRLSMTQIE
AALGALAGVD RQAKGLDRIG DPWDSLLRAA MTLAGGERRE NRTR