Gene Tbd_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2439 
Symbol 
ID3673949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2509437 
End bp2509958 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID637711145 
Producthypothetical protein 
Protein accessionYP_316197 
Protein GI74318457 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGGCC GGCGAAGCGG CGCGCGTACG CAAGGCGACA CGCTAGGCCG CATGAAGCTG 
CAGCTCATCG CAGTCGGGCA CAAGATGCCG GACTGGATCA ACGCGGGGTA TGCGGACTAT
GTGCGGCGCA TGCCGGGCGA TCTGCAGCTC GCGTTGACCG AGATCAAGCC GGGGCATCGG
GTGGCGGGCG CGGACGGCGC GCGGGCCCGC CAGCTCGAGG CGGCGCGCAT CCTCGCCGCT
ATTACGCCCG GCGCGGTGCG CGTCGTGCTC GACGAACGCG GCACGCAGGC GACGACGCGC
GAGCTCGCGG GCTGGCTCGA GAACTGGATG GGCGAGGGGC TCACGCCCGC GTTCGTGATC
GGCGGTGCCG ACGGGCTCGA CGACAGCGTC AAGGCCGGCG CCGGCAAGCT CTTCGGCCTG
TCGCGGCTTA CACTGCCGCA TGCGCTCGCG CGCGTGATCC TCGCCGAGCA GCTGTACCGT
GCCGCATGCA TCATCAAGGG GCATCCCTAC CATCGGGATT GA
 
Protein sequence
MGGRRSGART QGDTLGRMKL QLIAVGHKMP DWINAGYADY VRRMPGDLQL ALTEIKPGHR 
VAGADGARAR QLEAARILAA ITPGAVRVVL DERGTQATTR ELAGWLENWM GEGLTPAFVI
GGADGLDDSV KAGAGKLFGL SRLTLPHALA RVILAEQLYR AACIIKGHPY HRD