Gene Tbd_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2435 
Symbol 
ID3673945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2505845 
End bp2506612 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID637711141 
Productexodeoxyribonuclease III 
Protein accessionYP_316193 
Protein GI74318453 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.147349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCGCCTGGAA CGTCAACTCG CTCAAAGTCC GCCTGCCGCA ACTGCTGGAT 
TTTCTCGCGA CACGCCGGCC CGACGTCGTC TGCCTGCAGG AAACCAAGGT CCCCGACGAC
GCCTTTCCGT CCGTCGAGCT GTCGGCGGCG GGGTATCGCG CGGTCTTTTC CGGGCAGAAA
ACCTATAACG GCGTCGCGAT CCTGAGTCGT TCACAAGCCA CGGACGTGAG CGTCGGCATT
CCGGGCTTCG GCGACGAGCA GAAGCGCGTC ATCGCGGCGA CGGTTGAAGG CACACGCGTC
GTCTGCGTCT ATTGCCCGAA CGGCCAGAGC CCCGATTCCG ACAAGTATTT CTACAAGCTT
GCCTGGTTCG ATGCGCTCTC GCTGTGGCTC ATGGAGGAGC TTGCGCGCCA CCCAAGGCTG
GCCGTCCTCG GCGACTTCAA CATCGCGCCT GAAGATCGCG ACGTCCACGA TCCCAAGGCG
TGGGAAGGTT CGGTGCACGT GTCACCGCGC GAGCGCGAGC GCTTCCAGGC GTTGCTGCAG
CTCGGTCTCA AGGACAGCTT CCGCCTGTTC GAACAGCCGG AGAAGAGTTT CTCGTGGTGG
GACTACCGGA TGATGGGGTT TCGCCGCAAC CACGGCCTTC GGATCGACCA TATCCTGCTA
ACCGACGCGC TCGCCGCGAG CTGCACCTCG AGCACGATCG ACCGCGACAT GCGCAAACTC
GAGCGGCCGT CGGACCACGC GCCGGTGCTG GCGGAGATCG GCGTCTAA
 
Protein sequence
MKIAAWNVNS LKVRLPQLLD FLATRRPDVV CLQETKVPDD AFPSVELSAA GYRAVFSGQK 
TYNGVAILSR SQATDVSVGI PGFGDEQKRV IAATVEGTRV VCVYCPNGQS PDSDKYFYKL
AWFDALSLWL MEELARHPRL AVLGDFNIAP EDRDVHDPKA WEGSVHVSPR ERERFQALLQ
LGLKDSFRLF EQPEKSFSWW DYRMMGFRRN HGLRIDHILL TDALAASCTS STIDRDMRKL
ERPSDHAPVL AEIGV