| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2419 |
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| Symbol | |
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| ID | 3673929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2490089 |
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| End bp | 2491132 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637711125 |
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| Product | pilus retraction ATPase PilT |
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| Protein accession | YP_316177 |
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| Protein GI | 74318437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATATTT CTGAATTGCT CGCTTTCGCC GTCAAAAACA AGGCTTCCGA CCTGCACCTT
TCCTCGGGTC TGCCGCCGAT GATCCGCGTG AACGGCGACA TCCGCCGCAT CAACCTGCCG
CCGATGGAGC ACAAGGACGT GCACCGCATG GTGTACGACA TCATGAACGA CAGCCAGCGC
AAGGTGTACG AGGAGACGCT CGAAATCGAC TTCTCGTTCG AGATACCCTC GCTCGCGCGC
TTTCGCGTCA ACGCGTTCAA CCAACAATAC GGCGCGGGCG CCGTGTTCCG CACGATTCCG
TCGAAGGTGC TGACGCTCGA AGAACTGAAC TGCCCGCCGA TCTTCAAGGA AATCGCCGAC
CAGCCGCGCG GCATCGTGCT CGTCACCGGG CCGACGGGTT CGGGCAAGTC GACGACGCTC
GCGGCGATGA TGGACTACGT CAACGAGAAC CAGTATTCGC ACATCCTCAC CGTCGAGGAC
CCGATCGAAT TCGTCCACCA GAGCAAGAAA TGCCTGATCA ACCAGCGCGA GGTCGGGCCG
CACACGCTCT CGTTCAACAA CGCCTTGCGT TCCGCGCTGC GTGAAGACCC CGACGTCATC
CTGGTCGGCG AATTGCGCGA CCTCGAAACG ATCCGCCTCG CGCTGACCGC TGCCGAGACG
GGCCACCTCG TCTTCGGCAC GCTCCACACC TCGTCGGCGG CCAAGACGAT CGACCGCGTC
GTCGACGTCT TCCCCGCTGC GGAAAAGGAA ATGGTCCGCT CGATGCTCTC GGAATCGCTG
CGCGCGGTGA TTTCGCAGAC GCTGCTGAAG ACCAAGGACG GCACCGGCCG CGTCGCCGCG
CACGAAATCA TGGTCGGCAC CCCGGCGATC CGCAACCTGA TCCGCGAGAA CAAGGTCGCA
CAGATGTATT CGGCGATCCA GACCGGCGGC AACCTCGGCA TGCAGACCCT CGACCAGAAC
CTGCAGGATC TCGTGCGCCG CAACGTCATC GCGTCGAACG TGGCCCGCTC CGCGGCGCAG
AACAAAGACG CCTTCATGCT CTGA
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| Protein sequence | MDISELLAFA VKNKASDLHL SSGLPPMIRV NGDIRRINLP PMEHKDVHRM VYDIMNDSQR
KVYEETLEID FSFEIPSLAR FRVNAFNQQY GAGAVFRTIP SKVLTLEELN CPPIFKEIAD
QPRGIVLVTG PTGSGKSTTL AAMMDYVNEN QYSHILTVED PIEFVHQSKK CLINQREVGP
HTLSFNNALR SALREDPDVI LVGELRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRV
VDVFPAAEKE MVRSMLSESL RAVISQTLLK TKDGTGRVAA HEIMVGTPAI RNLIRENKVA
QMYSAIQTGG NLGMQTLDQN LQDLVRRNVI ASNVARSAAQ NKDAFML
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