Gene Tbd_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2412 
Symbol 
ID3672292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2483397 
End bp2483813 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637711118 
Productpentitol phosphotransferase enzyme IIA component 
Protein accessionYP_316170 
Protein GI74318430 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGCA TCCTCATCGT CGCGCACGGC TCGCTCGCCG ACAGTCTGGT CGAGTGCGCG 
ACCCATGTGC TCGGACTGCA GCCGAGCGGC CTCGCGACGC TCGACTTCAT CGGCCATGCC
GACCCTGACG AGCGCGAGAG AGCCCTCCAG GCACGGCTCG CCGAACTCGA CGAAGGCGAC
GGGATCCTGG TCCTCACCGA CGTCTACGGC GCCACGCCAA GCAACACGCT GTGCCGCCTG
CTGGAGCCGG CGCACATCGA GGGGGTCTCC GGCGTCAACC TGCCGATGCT GCTCAAGGCC
CTCAATTACC GCGAGACGCT GACGCTGACG CAACTCGTCG AGCGCATCGT CGAAGGCGGG
CGCAACAGCA TCAACCACAT TTCCGAGACC ATGTGCAATG CAGCAACGGG ACGTTGA
 
Protein sequence
MIGILIVAHG SLADSLVECA THVLGLQPSG LATLDFIGHA DPDERERALQ ARLAELDEGD 
GILVLTDVYG ATPSNTLCRL LEPAHIEGVS GVNLPMLLKA LNYRETLTLT QLVERIVEGG
RNSINHISET MCNAATGR