| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2396 |
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| Symbol | |
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| ID | 3671441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2469164 |
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| End bp | 2470204 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637711102 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_316154 |
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| Protein GI | 74318414 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAGTC CCGTTCGTCT ACTGGTCTGC GCCCTCCTGC TCTCGCCTTC CGCCTGGGGG
GCACTACCGT TCGCGGTTGC GCCGGTCAAA TATCAGGTCG CGGACAGCGG CTACAGCACC
GAAGCGAGCG TAGAAGCGGT CAAACAGTCG ACGCTCGCCG CGCAGGTTTC CGGCCGGGTT
GCAGCGGTCA ACTTCGACGC CGGCGATTAC GTCAAGGCGG GCACGGTGCT CGTGCGGCTG
TCGGCGCAGG AGCTCTCGTC GGCCGTTGCC GGCAGCCAGG CACAGGTCGC GGAAGCCGCG
GCGGCGCTCG CCAATGCACG TGCCAATTAC GAGCGCCAGC AGCAGCTGTT CCGCCAGCGA
TTCATCAGCC AGGCCGCGCT CGACCGCGCC ACCGCCGAGT TCCGCGCCGC CGAGGCAGCG
GCGCGCGCAG CCCGCGCCGG GGCCGGCGAG TCTTCCGCGG TACGCGGCTA CACCGTGATC
CGCGCGCCGT ATTCGGGCGT CGTCGCGGCG CGCCACGTCG AGGTCGGTGA AACGGTGACA
CCCGGCAAGC CATTGATGAC CGGCTTCGAC CCCAAGGACA TGCGGGTCGT CGCCAACATC
CCGCAATACA AGCTTGCCAC CGTGAAGGCC GCGCCGCGCG TCGCGGTCGA AATCCCCTCG
CTCAACAAGT GGATCGACGC CGTCGGCGTC ACGGTCCTCC CCTCGGCCGA CGCGGCGACG
CACACGGTCA AGGTGCGGCT CGACCTGCCG GCCGACGTCG ACGGCGTCAT CCCCGGCATG
TTCGCGCGCG CGCACTTCTC GACCGGAAGC GCGCGCAAGC TCGTGATCCC GCTCGCCGCG
CTGGTGCGCC GGTCCGAGAT CACGGCCGTC TACGTCGTCA GCGGCGAGCG GGTGAGCCTG
CGCCAGCTGC GCCTCGGGAC GCCGAATGCG CGCGGCCAGG TCGAAGTGCT CGCGGGACTC
AATCCCGGCG ACATCATCGC GCTCGAGCCG ATCAAGGCCG GGATCTACGC CAAGAGCGCC
GCCAACAAAT CGGCCAAATA A
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| Protein sequence | MLSPVRLLVC ALLLSPSAWG ALPFAVAPVK YQVADSGYST EASVEAVKQS TLAAQVSGRV
AAVNFDAGDY VKAGTVLVRL SAQELSSAVA GSQAQVAEAA AALANARANY ERQQQLFRQR
FISQAALDRA TAEFRAAEAA ARAARAGAGE SSAVRGYTVI RAPYSGVVAA RHVEVGETVT
PGKPLMTGFD PKDMRVVANI PQYKLATVKA APRVAVEIPS LNKWIDAVGV TVLPSADAAT
HTVKVRLDLP ADVDGVIPGM FARAHFSTGS ARKLVIPLAA LVRRSEITAV YVVSGERVSL
RQLRLGTPNA RGQVEVLAGL NPGDIIALEP IKAGIYAKSA ANKSAK
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