Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2392 |
Symbol | |
ID | 3671437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2463995 |
End bp | 2465401 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637711098 |
Product | peptidase S41A, protease |
Protein accession | YP_316150 |
Protein GI | 74318410 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.605927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA AGTCGAAATT CGTTCTCGTC GGTGTGGCCG GCGTGCTGGC GGGCGCTGCC CTCACGCTCA ATCTTTCGGC GATCGCCGAC AAGGAGGCCG GGGCGCCGCT GCCAATCGAG GAGTTGCGCG CATTCACCGA CGTGTTCGCG CGGGTCAAGA ACGACTACGT CGAGCCGGTC GAGGACAAGA AACTCATCAC CGAGGCGATC AACGGCATGC TGACCGGCCT CGATCCGCAC TCCGCCTATC TCGACGTCGA GGGATTCAAG GACCTGCAGG TCGGGACCCA GGGCGAATTC GGCGGGCTGG GCATCGAAGT CGGGATGGAA GAGGGCTTCA TCAAGGTCGT TTCGCCGATC GAGGATACGC CCGCATTCAA GGCCGGCGTG AAGCCCGGCG ACCTCATCGT CAAGCTCGAC GACACCCCGG TGAAGGGCAT GGCGCTCAAC GACGCCGTCA AGCGCATGCG CGGCAAGCCG GGTTCGAAAA TCCGGCTCAC CGTCGCGCGC AAGGGCGTCG ACAAACCGAT CGTGCTGACG CTCACGCGCG CGATCATCAA GATCCGCAGC GTCAAGTCGA AGCTCATGGA AAGCGGCTAC GGCTATGTGC GTGTCACCCA GTTCCAGGAG CACACCGGGG AACTGCTGGC GGAAGCCCTG AACGCGCTGT ACAAGAACAA CAAGGCGCCG CTCAAGGGCC TCATCCTCGA CCTGCGCAAC GACCCCGGCG GTCTTCTCAA CGGCGCGGTC GCCGTCACCG CAGCGTTCGT CAAGCCCGAC GCACTCGTCG TCTACACCGA GGGGCGCACG CCGGATGCCA AGATGCAGCT CACCGCGCGC CGCGAAAACT ATCTGCGCCC GATGCAGGCG GACTACCTGA AGAACCTGCC GCAGGGCGTG AAACAGGTGC CAATGGTCGT GCTCGTCAAC AGCGGCTCGG CGTCGGCCTC GGAGATCGTG GCCGGCGCGC TGCAGGACCA CAAGCGCGCC GTGGTCATGG GCACGCGCAC CTTCGGCAAG GGCTCGGTGC AGACCATCCT GCCGCTCGGC AACGGCACCG CGATCAAGCT CACGACCGCC CGCTATTTCA CGCCGAACGG GCGCTCGATC CAGGCCAAAG GCATCGAACC CGACATCGTC GTCGAGGATC CGAGCATGCC GTCGGAAGAC GACGGCCTCG GCATCCGCGA GGCCGACCTC GCCAAGCACC TGGCCAATCC TTCCGACAAG GAGGGTACGT CCATCGTCGT GCCGGCCGAC GACGAGGCCG GGCCCGCGGA GCAGCCCTCG CGGGAAAGAA AGCCGCTCGC ACCGCTCGAA CCCGGTGAAA TCGTGTCCAA GAACGATTTC CAGGTCAATC AGGCGCTGAA CCTGCTGAAA GGCCTGCAGA TTCTCCAGGC GCACTGA
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Protein sequence | MTQKSKFVLV GVAGVLAGAA LTLNLSAIAD KEAGAPLPIE ELRAFTDVFA RVKNDYVEPV EDKKLITEAI NGMLTGLDPH SAYLDVEGFK DLQVGTQGEF GGLGIEVGME EGFIKVVSPI EDTPAFKAGV KPGDLIVKLD DTPVKGMALN DAVKRMRGKP GSKIRLTVAR KGVDKPIVLT LTRAIIKIRS VKSKLMESGY GYVRVTQFQE HTGELLAEAL NALYKNNKAP LKGLILDLRN DPGGLLNGAV AVTAAFVKPD ALVVYTEGRT PDAKMQLTAR RENYLRPMQA DYLKNLPQGV KQVPMVVLVN SGSASASEIV AGALQDHKRA VVMGTRTFGK GSVQTILPLG NGTAIKLTTA RYFTPNGRSI QAKGIEPDIV VEDPSMPSED DGLGIREADL AKHLANPSDK EGTSIVVPAD DEAGPAEQPS RERKPLAPLE PGEIVSKNDF QVNQALNLLK GLQILQAH
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