| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2387 |
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| Symbol | |
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| ID | 3672979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2458278 |
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| End bp | 2459975 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637711092 |
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| Product | DNA primase |
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| Protein accession | YP_316145 |
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| Protein GI | 74318405 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.38837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGC GCGATTTCAT CGATACCCTG CTGAGCCGCG TCGACATTGT CGACGTGATT
GACCGACGGG TTCCCCTCAA GAAAGCCGGC CAGAACTACC AGGCCTGCTG CCCCTTTCAC
AGCGAAAAGA CGCCGTCCTT CACGGTCAGT CCCAGCAAGC AGTTCTACCA CTGCTTCGGT
TGCGGCGCCC ACGGCACCGC GCTCGGCTTC CTAATGGAAT ACGAGCACAT GAGCTTTCCC
GACTCCGTCG CCGCGCTTGC CGAGGACGCG GGCCTGCCGA TGCCGGAATC GAGCCTCGAA
CCCGAGCGTC CGAAACCACC GCCAGCGCTG TGGGACGCGC TAGAACAAGC GGCACGCTTC
TACAAGCAGC AACTCAAGCA GGCACCGCAT GCGATCGACT ACCTCAAGCA GCGCGGCCTG
AGCGGCGCCA TCGCCGCGCG CTACGGTATC GGTTACGCTC CCGACGGATC GCCGCTCAAA
CGCGTTTTCG CCGACTACGA CGCAGAGGCG CTCGCCGCCT CGGGACTGGT CGTCGACAAC
GAAGGCCGAC GCTACGACCG CTTCCGCGAC CGCATCATGT TTCCCATCCG CAACGTCAAG
GGTCAGATCG TCGGCTTCGG CGGCCGGGTG CTCGGGCAGG GCGAGCCGAA ATACCTGAAC
TCCCCGGAAA CGCCGCTGTT TCACAAAGGC TCGGAAATCT ACGGGCTGTT CGAAGCGCGT
GCCGCGATCA AGCGCGCGGC GCGGGTCGTC GTCGTCGAGG GCTATATGGA CGTCGTGGCG
CTCGCGCAGC ACGGCGTCGA ATTCGCCGTC GCGACGCTCG GCACGGCGAC GACGCCCGTC
CACGCGCGCA CGCTTCTGCG CCATAGCGAC CGGCTTGTCT ACGCCTTCGA TGGCGACGCC
GCCGGGCGCA AGGCCGCGTG GCGGGCGCTG GAAAACAGCC TCGAAGCGCT GCAGGACGGC
AAGGAAGTCA GCTTCCTGTT CCTGCCTGAA GGCGAGGATC CGGACAGCTA CATCCGCGAC
CACGGCTGCG ACGCCTTTCT GCGACTCCTC GACAATGAAA CCTTGCCCTT GTCGGCGTTC
CTGATGCGCG AACTCGCGCG CGGCCGACGA CTCGACACTC AGGAAGGCCA GGCGACCCTG
TTGAAGGACG CCAAGCCGCT GCTGGAAAAA ATCGGCGCAC CGCTGCTCGC ACGCCTCATT
CAGCGTCAAA TCGCGGAGTT GACGCAACTT CAGGTCGGCG ATCTCAGCGC AATGGGCCTG
CGACCGGTCG CGTCCCGCCC GCTTCCGCCG CGCCAACAAC GCCGCATCGC CCCTTCGCGC
CTCCGGGGTT TGGCACGCAT TCTGCTAATG AATCCGCAGC GGGCAAGCGA AGTCGAGCCG
CTTTGGTTCG ATGCGCGCGA TCCGCTCCAT GCGACGGCAG GCGAACTGAT CGCCTGGCTG
CGCGAAGTGG GGCCGCTCAG GCTGCACACA TTGGCGGAAG CCGCGAAGGG CAGCGGCATG
GAAGACTTCG TCAATGAACT GATGGTCGAT TTACTCGACA AAGATGACAC CTGGGACTGG
AACGCGGAGT TCGAAGGTGC CGTCCAACAA CTACGCGACG ACTGGCGCCG CCGCCGGGTG
CAGGAATTGG CGGCCCGTCC GCTCGCCAGC CTGTCGGTCG AAGAGCGCCG CGAACTGGGT
GACTTGGCAC GCTCGTAG
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| Protein sequence | MIPRDFIDTL LSRVDIVDVI DRRVPLKKAG QNYQACCPFH SEKTPSFTVS PSKQFYHCFG
CGAHGTALGF LMEYEHMSFP DSVAALAEDA GLPMPESSLE PERPKPPPAL WDALEQAARF
YKQQLKQAPH AIDYLKQRGL SGAIAARYGI GYAPDGSPLK RVFADYDAEA LAASGLVVDN
EGRRYDRFRD RIMFPIRNVK GQIVGFGGRV LGQGEPKYLN SPETPLFHKG SEIYGLFEAR
AAIKRAARVV VVEGYMDVVA LAQHGVEFAV ATLGTATTPV HARTLLRHSD RLVYAFDGDA
AGRKAAWRAL ENSLEALQDG KEVSFLFLPE GEDPDSYIRD HGCDAFLRLL DNETLPLSAF
LMRELARGRR LDTQEGQATL LKDAKPLLEK IGAPLLARLI QRQIAELTQL QVGDLSAMGL
RPVASRPLPP RQQRRIAPSR LRGLARILLM NPQRASEVEP LWFDARDPLH ATAGELIAWL
REVGPLRLHT LAEAAKGSGM EDFVNELMVD LLDKDDTWDW NAEFEGAVQQ LRDDWRRRRV
QELAARPLAS LSVEERRELG DLARS
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