Gene Tbd_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2375 
Symbol 
ID3671868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2450172 
End bp2450882 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID637711080 
ProducttRNA (Guanine37-N(1)-) methyltransferase 
Protein accessionYP_316133 
Protein GI74318393 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.51648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCG ACGCGGTCAC GCTCTTCGCC GAGATGTTCG ATGCGGTACT GGACTACGGC 
ATCACGCGAC GCGCGCTGGA TCGCGGGCTT TACCGATTCA AGTCGTGGAA CCCCCGCGCC
TTCACCGACG ATCCGCATCG TACGGTCGAC GACCGGCCCT ACGGTGGCGG CCCCGGCATG
CTGATGCTGG CCGAGCCCCT GGACCGTGCG CTGAATGCCG TGCAGCAGGA ACTGGCGAGC
GAGAATCTGG CGCCGTGGGT GGTGCATTTT TCGCCGCGCG GCCGCCCGCT GACGCAGCAG
CGGGTGATGG AACTGAAGGA CATGCCCGCA CTCGTGCTGC TTTGCGGGCG ATACGAAGGC
ATCGACGAGC GGCTGCTGCA GCGCCGCGTG GACGAGGAGG TCTCGCTCGG CGACTTCGTG
CTGTCGGGCG GCGAATTGCC CGCGCTGGCG CTGATGGACG CGATCGTCCG CCAGTTGCCG
GGCGCCCTGA ACGACGCGGA GTCGGCGGCA CAGGACTCGT TTAGCGCTGG GCTCCTCGAC
TGCCCGCATT ACACGCGACC CGAGGTCTGG CAGGGCATGG CGGTGCCGCA AGTGCTGAAA
AGCGGCAACC ACGCGGCAAT CGCCAAGTGG CGGCACGAAC AGAGCCTGCG GCTAACGGGG
GCCCTGCGGC CCGACCTGCT GGAACGGGCG CAGCACGATG AACGGAATTG A
 
Protein sequence
MRFDAVTLFA EMFDAVLDYG ITRRALDRGL YRFKSWNPRA FTDDPHRTVD DRPYGGGPGM 
LMLAEPLDRA LNAVQQELAS ENLAPWVVHF SPRGRPLTQQ RVMELKDMPA LVLLCGRYEG
IDERLLQRRV DEEVSLGDFV LSGGELPALA LMDAIVRQLP GALNDAESAA QDSFSAGLLD
CPHYTRPEVW QGMAVPQVLK SGNHAAIAKW RHEQSLRLTG ALRPDLLERA QHDERN