Gene Tbd_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2372 
Symbol 
ID3671865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2447148 
End bp2447936 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637711077 
Producttransmembrane protein 
Protein accessionYP_316130 
Protein GI74318390 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.34584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCGT TTTCGCTGGC CGCCCTGTGC GTGAGCGCCG CGTATGGCTG GATGGCCTGG 
CGCATGCGCA GCGTCTCCCC GCAATCGTTC TGGCTACGCC TCGGTCTGCC TGCGACGCTG
CTCGCGCACG GGGCCTTGCT GTACGTATCG GTACTCGGCG AGGGCGATAT CCGCCTCGGC
TTCGGCAACT CGGTGTCGAC CGTGTTCTGG CTGGCGGCGC TCATGTACTG GGCCAGCAGC
CACGGCGCGC CGCTCGCCCG GGTACAGTCC TGGGTCACCG GCCTTGCTTC CGCCGGAACG
CTCTTCCTGG CCATTTTCAC GGCCGCGCAT GTCATCCCCA ACTCGCAGAT GCTGGCCCTG
CGCGCCCATC TCGCGGTCTC GTTTCTCGCC TATGGCCTGC TCGCCGTGGC CGCGCTGCAC
GCCCTGCTGA TGACAATCCT CGAAAAGCAG TTGCACCGCG GTGCCGTGGC GGTGGGTGCG
GCGCCGCCCC TGCTTACCCT GGAGGCGATC CTTTTTCGCA CCATCGGTGC GGGCTTCGTG
CTGCTGACGC TCGTGGTGTC GAGCGGCATC CTGTTTTCCG AGGAGCTGTT CGGCCAACCG
CTGCAACTCA CGCACAAGGT CGTCTTCGGC ATCCTCTCGT GGCTGGTTTT CGGCGGCCTG
CTGCTCGGCC GGCATTTCCG TGGCTGGCGA GGGCGCACGG CCTTGTGGTG GACGATCACG
GGCTTCACCC TCTTGCTCAT GGCCTACGTC GGGACGCAAT TCGTGCTCGA AGTCGTGCTC
GGGCGTTGA
 
Protein sequence
MSPFSLAALC VSAAYGWMAW RMRSVSPQSF WLRLGLPATL LAHGALLYVS VLGEGDIRLG 
FGNSVSTVFW LAALMYWASS HGAPLARVQS WVTGLASAGT LFLAIFTAAH VIPNSQMLAL
RAHLAVSFLA YGLLAVAALH ALLMTILEKQ LHRGAVAVGA APPLLTLEAI LFRTIGAGFV
LLTLVVSSGI LFSEELFGQP LQLTHKVVFG ILSWLVFGGL LLGRHFRGWR GRTALWWTIT
GFTLLLMAYV GTQFVLEVVL GR