Gene Tbd_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2364 
SymbolcbbI 
ID3671857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp2439662 
End bp2440318 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID637711069 
Productribose-5-phosphate isomerase A 
Protein accessionYP_316122 
Protein GI74318382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.760818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.131374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG ACGAAATGAA GCGAGCCGTA GCGCGTGCTG CGGTGGATTA TGCCAAGGGC 
GGCATCATCG GCGTAGGAAC CGGCTCGACC GCGAACCATT TCATCGACGC CCTGGCCGAA 
GTCAAGGGGC GCATCGAGGG CACGGTGGCG AGTTCCGAGG CGACGGCGGC GCGGCTGAAA 
AGCCACGGCA TACAGGTGCT CGACCTCAAC AGCGTCGGAG AGCTCGAGGT CTACGTCGAT 
GGGGCTGACG AGATCACGCA GCATTTCGCG ATGATCAAGG GCGGCGGCGG CGCGCTGACG 
CGGGAAAAGA TCGTTGCGGC GTGCAGCAAG CAATTCGTCT GTATCGCCGA CGACAGCAAG 
CTCGTCGACG TTCTCGGCAA ATTCCCGCTG CCGGTCGAGG TGATCCCGAT GGCCCGCTCG 
CACGTCGCGC GGGAGCTCGT GAAGCTCGGC GGCCAGCCCC GCCTGCGCGA GGGCTTCACG 
ACCGACAACG GCAACGTGAT CCTCGACGTG CACAACCTTT CGATCATCGA CCCGGTATCG 
CTCGAGACCG CGATCAACCA GATCGTCGGC GTGGTCACCA ACGGCCTCTT CGCCCGGCGC 
GGCGCCGACG TGCTGTTGCT CGGCACGTCG ACCGGGGTCA AGACCTTCAC GAGATAG
 
Protein sequence
MTQDEMKRAV ARAAVDYAKG GIIGVGTGST ANHFIDALAE VKGRIEGTVA SSEATAARLK 
SHGIQVLDLN SVGELEVYVD GADEITQHFA MIKGGGGALT REKIVAACSK QFVCIADDSK 
LVDVLGKFPL PVEVIPMARS HVARELVKLG GQPRLREGFT TDNGNVILDV HNLSIIDPVS 
LETAINQIVG VVTNGLFARR GADVLLLGTS TGVKTFTR