Gene Tbd_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2358 
Symbol 
ID3671576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2430992 
End bp2431738 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID637711063 
Productferredoxin-NADP reductase 
Protein accessionYP_316116 
Protein GI74318376 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.61983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTATA GCGAACAAAC CGTACAGTGG GTGCGGCCGT GGTCCGACAA GACGTTCAGC 
TTCACGGTGA CGCGTCCGCA GGATTTCTCG TTCGCGAACG GCGAGTTCGT CACGATCGGA
CTCAAGCAGG AAGGCAAGCT CGTGGCGCGT GCCTATTCGA TCGTCTCGAC GGCCGACCGC
GACTATCTCG AGTTCCTGAG CATCCATGTC CCGGACGGGC CGCTGACGAG TCAGCTTTCA
CAGATCAAGC CGGGCGACCG GGTCTGGATC AACAACAAGA CGACGGGAAC GCTGACGCTC
GACCACGTGT CGCCGGGGCG CGTCCTTTAC ATGCTCGCCA CCGGCACCGG GGTCGCGCCC
TTCGTGAGCC TCGTGCGCGA TCCCGCGATC TTCGCGCGCT TCGAAACGGT CGTGCTCGTG
CATTCGGTTC GGACGGCCGC CGAACTCGCG TATCGCGAGG AACTCGAGGC CATGGACCAG
CCACAACTGC ACTACGTGCC GACGGTGACC CGCGAGCCGT TTCCGACGAC CGAGCGCGGC
AGCGAACTTT TTCGCTCGGG CCTGCTGTCG CAGCGCCTGG GTTTACCGCC GCCCGACCCC
GAGCAGGACC GCGTGATGAT CTGCGGCAAC CCGCAGATGA CGCGCGAAAT GACGCGCTTT
CTCAAGGACA CCGGCTGGAC GCTGACGACC CCGCGCGGGC TCGGCAATTT CACGACAGAA
GTCGCCTTCG TCCTGCATCA CGGCTGA
 
Protein sequence
MPYSEQTVQW VRPWSDKTFS FTVTRPQDFS FANGEFVTIG LKQEGKLVAR AYSIVSTADR 
DYLEFLSIHV PDGPLTSQLS QIKPGDRVWI NNKTTGTLTL DHVSPGRVLY MLATGTGVAP
FVSLVRDPAI FARFETVVLV HSVRTAAELA YREELEAMDQ PQLHYVPTVT REPFPTTERG
SELFRSGLLS QRLGLPPPDP EQDRVMICGN PQMTREMTRF LKDTGWTLTT PRGLGNFTTE
VAFVLHHG