Gene Tbd_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2353 
Symbol 
ID3671571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2427465 
End bp2428751 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content71% 
IMG OID637711058 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_316111 
Protein GI74318371 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.657028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.419056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGCA TCGCCAGTTC GCTCTACGCG CGCACGGCGC TGACGCTGGC CATCGCTTTC 
GTCCTCTTTC AGGCCGCCGC CTTCGCGGTC GTATACCGCA CCCTGATCAT CCCGCTGGCC
GAGCGCTCGG CCGACGACCT CGCGGGCCTG ATCGTGCTGT CGGCTCAGAC CTGGGTCGAA
CTGCCGCCGC AAACCCGCGC CGCGTTCGAG CGGGAACTGG CGGACCGGCA CGGTCTGCGT
CTCACGGCCG GCGATCCCGG CGCGGTCGCC GACGCGCCGC AGTTCGCGTT CCGTGCGCAG
ATCGAGACCG CCCTCAGCCG CCGCGTGGGC GAGCCGGTCA AGCTTCGGGG GGTGCCCGGG
ACACGCGCGG CCTGGCTCGA CATCCCGACC GGCGGCCATG CCCTGCAGGT CGGCTTCTAC
CCGGCGCGCT ACGCGGTGAA GCCGCCGCTG GCGGCGATCG CTGTGATCGC GCTCGGCGCC
CTGCTCAGTC TGGTGACCGC GCTGCTGCTC GTGCGCCGCA TCACGCTTCC GCTCGCGCGG
GCGGCGCGGG CCGCACGGCA GGTCGGCGCG GGCCAGCTCC CCGAGCCGCT GCCGGAGACC
GGCCCGGCCG AGGTCGCCGA ACTCGCGCGT CGCTTCAACA CCATGGCGAC CGAGGTCCGC
GAGCTGCTCG ACAACCGCAC GACCCTGCTC GCCGGAATCT CGCACGACCT GCGCACGCCG
ATGACCCGGC TCCAGCTCCA TCTCGAAATG CTGCGCGACG CGCCGAGCCC GGCACGAATC
GATCGCGCCG TCGCCGACCT CGCCGACATG AACAAGCTCA TCACAGGCTA TCTCGAACTC
GCGCGCACGA CCCAGGCCGA GGCGAAGACG CGCTTCGACC TCGCGGTCCT GCTCGAGGAA
GTCGCGACCG ACGCGGGCCT GGCGGGATTT TCCGCGGCGC CGTGCACGGT CGAGGCGGGC
CGCCTGGCAC TGCGCCAGAT CGTGTCGAAC CTGATCCAGA ATGCGCAGCG CTACGGGGAC
GCAGCGACGG TCGAACTCGA ACTCGAATGC TCGGAGCTGG GGGCGCGGGT GACCGTGCGC
GATGCGGGAC CGGGGATTCC GGAAGATCAG CTGGAGAAGG TGTTCCGGCC GTTCTACCGG
CTCGAGGCAT CGCGCTCGGA AGCGACCGGC GGAAGCGGTC TCGGGCTTGC GATCGTCCGG
CAGTTGGCGG CGACCCACGG TTGGAAAGTC TCGCTGGCCA ACCGCAAGAC CGGCGGGCTC
GAGGCGGTGC TCGAAATCCG CCGCTAG
 
Protein sequence
MVRIASSLYA RTALTLAIAF VLFQAAAFAV VYRTLIIPLA ERSADDLAGL IVLSAQTWVE 
LPPQTRAAFE RELADRHGLR LTAGDPGAVA DAPQFAFRAQ IETALSRRVG EPVKLRGVPG
TRAAWLDIPT GGHALQVGFY PARYAVKPPL AAIAVIALGA LLSLVTALLL VRRITLPLAR
AARAARQVGA GQLPEPLPET GPAEVAELAR RFNTMATEVR ELLDNRTTLL AGISHDLRTP
MTRLQLHLEM LRDAPSPARI DRAVADLADM NKLITGYLEL ARTTQAEAKT RFDLAVLLEE
VATDAGLAGF SAAPCTVEAG RLALRQIVSN LIQNAQRYGD AATVELELEC SELGARVTVR
DAGPGIPEDQ LEKVFRPFYR LEASRSEATG GSGLGLAIVR QLAATHGWKV SLANRKTGGL
EAVLEIRR