Gene Tbd_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2344 
Symbol 
ID3673472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2418109 
End bp2418762 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID637711049 
Producthypothetical protein 
Protein accessionYP_316102 
Protein GI74318362 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.394808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATACC GCCTGCGCCG CTCGCGCCGC CGCCAGACGC TGGGCCTGAC CGTCACCGCG 
GGCGAAGTGC GCATTCACGC ACCGAGCTGG ACCCCGCGCG CCGAGATCGA GCGCTACGTC
CGCGAACAGC ACGGCTGGCT CGCGCGCGCC TGGCAACGCA TGCAGCTGCG CGCGCCAGAA
TGTGACGCGG CGACGCAAAT CCGCTATCTC GGTCGCGAAC TCGCACTGGA CATCCGGCCT
TCGCTGTTCG GCGAGGTGCA GCGCGTCGGC GCGACCCTGC GGGTCTACCT GCCCGCGGGG
CAGGACGCCG ACGCGCTGCT AAGGGAGTGG TTGAGTAATC GCGCGGCGCG CGTCCTCGCC
TGGCGGATCG CGCGACTGGC TCGACGGCTC GGTCGTGGCC CGAGCCGTTT CGCGCTTTCC
GACGCGCGGA CGCAGTGGGG CAGTTGCACC CGGCGCGGCC ACATCCGTCT CAACTGGCGC
CTCGTGCAGG CGCCGCTCGC GCTCATCGAC TACGTCGCCG CGCACGAACT CGCGCATCTC
GTGCACCTGG ACCATTCGCC GCGCTTCTGG CAGCAGGTCG CACAGCTCTG CCCGGACGCG
CTGGTGCGCC GTGCCGAACT GCGCCGCGTC GGCGCGGCAC TGTTCCGGCT GTAA
 
Protein sequence
MPYRLRRSRR RQTLGLTVTA GEVRIHAPSW TPRAEIERYV REQHGWLARA WQRMQLRAPE 
CDAATQIRYL GRELALDIRP SLFGEVQRVG ATLRVYLPAG QDADALLREW LSNRAARVLA
WRIARLARRL GRGPSRFALS DARTQWGSCT RRGHIRLNWR LVQAPLALID YVAAHELAHL
VHLDHSPRFW QQVAQLCPDA LVRRAELRRV GAALFRL