| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2333 |
|---|
| Symbol | |
|---|
| ID | 3673461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2406620 |
|---|
| End bp | 2407756 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637711038 |
|---|
| Product | 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
|---|
| Protein accession | YP_316091 |
|---|
| Protein GI | 74318351 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.731744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAGG TCATCGTCGT CGGCGCCGGA CCCGTGGGAG CCGTCAGTGC GCTGGCCTTG
CAACAGCACG GCGTCGCCGC GCGCGTGCTC GAAGCGCGCG CCGAGGACGC CCGCGCCGAT
ACGCGGACCC TGGCGCTCGC GCACGGCGCG CGTCTGATTC TCGAGCGGCT CGGGGTCTGG
GCCCGCGTGC AGGACGTCAC GCCGATCACG CGCATCCACA TCTCGCAGCG CGGCGCGCTC
GGCGTGACCC GGCTCTCCGC CGAGGCGCTC GGCGTCCCGG CCCTCGGTTA CGTACTGTCC
TACGCGCACC TGACCGAGGT GCTGAAGCAG GCGCTGGCTG AAGCGCCCAT CGCCGTCGAG
TACGGCGTGC CGGTCGAGCG CATCGAACCG GGCATCGAGG CAGCCTGCGT ACAGGCGGCG
GACGGTCGCA CCTGGTCGGC CCCACTCGTC GCGGTCGCCG ACGGCGGACG GGGCACGCAG
ACGCCCGCGC CGCGCTTCGC GCACGATTAC GCGCAGACGG CCGTGGTGTG CGAAGTGCGG
ACCGAGCTCG CGCACGGCGG GCAGGCCTTC GAGCGCTTCA CGCCGGAAGG CCCGGCGGCC
TTGCTACCCA AGCGCGACGG CTACGCGCTG GTGTGGACCG CCGCGAGCGC CGAGGCCATG
CGTATCGCCG CATTGTCCGA CGCGGAATTT CTTGCCGCGC TCCAGCGCCA TTTCGGCGGG
CGCCAGGGCT TGTTCCTCGC CGCGACGCCG CGCAAGACCT TTCCGCTGCA TTGTGTCTAC
GCCGGGCGCG AAGTCGGCGC GCGCGTCGTG CGCATCGGCA ACGCGGCCCA GACGCTGCAT
CCGGTCGCAG GCCAGGGTTT CAACATCGGC CTGCGCGACG CCTGGGAGCT CGCGCGCCTC
TGTGCCGACA CCCCGGCGAC CGCCCTCGGC GGCGAGGCGA TGCTGCACGC CTACGCGCGC
GGCCGCCGCT TCGACGTCGT CGCCGGACTC GGCTTCACCG ACTTCCTGGT GCGCATGTTT
TCGAACGACG TCGCGGTGCT GCGTCACGCC CGCGGGCTCG GCTTGCTGGC GCTCGAGGCG
CTGCCGCCGC TGAAGGCCTT CGTCGCGCGG CGCATGATGT TCGGGGCGCG CGGGTGA
|
|---|
| Protein sequence | MNEVIVVGAG PVGAVSALAL QQHGVAARVL EARAEDARAD TRTLALAHGA RLILERLGVW
ARVQDVTPIT RIHISQRGAL GVTRLSAEAL GVPALGYVLS YAHLTEVLKQ ALAEAPIAVE
YGVPVERIEP GIEAACVQAA DGRTWSAPLV AVADGGRGTQ TPAPRFAHDY AQTAVVCEVR
TELAHGGQAF ERFTPEGPAA LLPKRDGYAL VWTAASAEAM RIAALSDAEF LAALQRHFGG
RQGLFLAATP RKTFPLHCVY AGREVGARVV RIGNAAQTLH PVAGQGFNIG LRDAWELARL
CADTPATALG GEAMLHAYAR GRRFDVVAGL GFTDFLVRMF SNDVAVLRHA RGLGLLALEA
LPPLKAFVAR RMMFGARG
|
|---|
| |