Gene Tbd_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2330 
Symbol 
ID3673458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2404125 
End bp2404730 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID637711035 
Producthypothetical protein 
Protein accessionYP_316088 
Protein GI74318348 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.43213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG AGTTCTGGAA CGCGCGCTAC GCGACCGACG AATACGTCTT CGGCACCGCG 
CCAAACGTGT TTCTGGCGAG CCAGAAGGCC TTGGTGCATC CGGGAATGCG GGCGCTGGCG
ATCGCCGACG GCGAGGGACG CAACGGCGTG TGGCTCGCCG AGCAGGGCGC GGCGGTGCAT
GCGATCGACG TCTCGCCGTT CGCGCTGGAG AAGGCCCGCA AGCTTGCGGC CGCGCGCGGC
GTCGCGCTCG AGACCGAAGA GGCCGATGCG CTGAACTGGC ACTGGCCGGA AGCGGCGTAT
GACCTGGTCG TCGCGATCTT CATTCAGTTC GCGCCGCCGC CCGCGCGGGA CCGCGTCATC
GACGGCATCC GCCGCACGCT CAAGTCAGGC GGCGTGCTGA TCCTGCAGGG CTACACGCCT
AAGCAGGGCG AGTTCGGCAC CGGGGGCCCG CCGAACGCCG AGAACATGTA CACCGCGGCG
CTGCTGCGCG AATGGTTCGG CGACTGGGAC ATCCTGCACC TGCGCGAACA CGAATCCTTC
ATCAGCGAAG GCTCGCATCA TCATGGTCAG TCTGCCTTGA TCGACCTCGT GGCGCGGAAA
GCCTAG
 
Protein sequence
MSTEFWNARY ATDEYVFGTA PNVFLASQKA LVHPGMRALA IADGEGRNGV WLAEQGAAVH 
AIDVSPFALE KARKLAAARG VALETEEADA LNWHWPEAAY DLVVAIFIQF APPPARDRVI
DGIRRTLKSG GVLILQGYTP KQGEFGTGGP PNAENMYTAA LLREWFGDWD ILHLREHESF
ISEGSHHHGQ SALIDLVARK A