Gene Tbd_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2293 
Symbol 
ID3673421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2367345 
End bp2368244 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID637710998 
Productphosphonate metabolism protein PhnJ 
Protein accessionYP_316051 
Protein GI74318311 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TGCCCCACAC CACCGGCGGC AACGCCTACA ACTTCGGCTT CCTCGACGAA 
TACGCCAAGA AGGAAATCCG CCGCGCCGTC CTCAAGGCCA TCGCCATCCC CGGCTACCAG
GTGCCCTACG CCTCGCGCGA AATGCCCATG GGACGCGGCT TCGGCACCGG CGGCCTGCAA
CTGACGCTGG CCCTGATCGG TCCCGGCGAG GTGGTCAAGG TCATCGACCA GGGTTCGGAC
GATTCGGTGA ACGCGGTCAA TCTGCGCCGG TTCATCGAAA TGACCTGCCC CGGCGTCTCC
ACCACCACCC GCACCGCGGA GGCGAGCCTG ATCCAGTCGC GCCACCGCAT CCCGGAACGG
CCGCTGACCC CGACGCAGAT CCTCGTGCTG CAAGTGCCTT ACCCGGACCC GCTGGTGGTG
GTCGAGCCGT CCGAGGACAA GCGCAAGATC ATGCACGGCG AGGCCGACTA TTCGCGCCTG
CTGGTGAAGC TGTACGAGGA CATCGTCCAG TTCGACGAGA TCACCATCTC GCACCGCTAT
CCGACGCGCA TCAACGGCCA CTACGTCATC GACCCCTCGC CGATTCCGCG CTGGGACGTG
CCCAGGCTCG ACCATGCGGC GGCGCTGACC CTGTTCGGCG CCGGGCGCGA GAAGAAGATT
TACGCGGTGC CGCCGCACAC TCGCGCGGAG CCGCTGGCGT TTTCCGACGT GCCGTTCCGG
GTCGAGGATT TCCGCGACGA GGCGGGACGC CGCCGCGCCT GCGCGCGCTG CGGCTGCACG
GATTCCTTTC TCGACGAGTT CAGCAGCGAT GCCGGCGAGA AGGTCTACCA ATGCTCGGAC
ACCGACTGGT GCGACGAAAA ACTGCTGCGC AAGGAATCGC TGCGGGGAGA AGCGGCATGA
 
Protein sequence
MNAMPHTTGG NAYNFGFLDE YAKKEIRRAV LKAIAIPGYQ VPYASREMPM GRGFGTGGLQ 
LTLALIGPGE VVKVIDQGSD DSVNAVNLRR FIEMTCPGVS TTTRTAEASL IQSRHRIPER
PLTPTQILVL QVPYPDPLVV VEPSEDKRKI MHGEADYSRL LVKLYEDIVQ FDEITISHRY
PTRINGHYVI DPSPIPRWDV PRLDHAAALT LFGAGREKKI YAVPPHTRAE PLAFSDVPFR
VEDFRDEAGR RRACARCGCT DSFLDEFSSD AGEKVYQCSD TDWCDEKLLR KESLRGEAA