Gene Tbd_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2280 
Symbol 
ID3673408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2353694 
End bp2354203 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID637710985 
Productputative peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_316038 
Protein GI74318298 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TCATCGAAGC CAACAAATAC GTCGAACTGA CCTACAAGGT CATCGACCAG 
AAAACCTGCC AGGTGCTGAC GCAGGTCGAG TTTCCGCTGG GCTACGTCCA CGGCGTCAAC
GAGATATTGT CGCCGCGCGT CATGGACGCG CTGGAAGGCA AATCCGAGGG CGACGTCATC
GAGGTCCCCA TCGACTGCAA CGACATCTAT GGCCCGCGCG ATGAATCCCT CGTGATCATC
GAAGCGATCG CGAACGTCCC CGAGGCCTAC CGCGAAGTCG GCACCGCCAT CCTGATGGAA
AACGACGCCG GGCAAACCAA AAGCTTTCTG GTGACGCGGG TCGACCACAG AACAGTGACG
ATAGACGGCA ACAACCCGCT GTGCGGCCGG CAGGTCGTTT TCAAGCTCGA GATCCTGATG
GTGCGTGACG CCACCGACGC GGAAATCCGC TACGGTGGCA AGGTGGAAGC GCCGCCAGAC
CTCAACAACT GTCGCGCCGT TCCCGTTTGA
 
Protein sequence
MKAIIEANKY VELTYKVIDQ KTCQVLTQVE FPLGYVHGVN EILSPRVMDA LEGKSEGDVI 
EVPIDCNDIY GPRDESLVII EAIANVPEAY REVGTAILME NDAGQTKSFL VTRVDHRTVT
IDGNNPLCGR QVVFKLEILM VRDATDAEIR YGGKVEAPPD LNNCRAVPV