Gene Tbd_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2279 
Symbol 
ID3673407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2352009 
End bp2353352 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content67% 
IMG OID637710984 
Producthistidine kinase 
Protein accessionYP_316037 
Protein GI74318297 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGA CGCAGGCCAT GGCTGCGCGT CGCAACACGG GAATTTCCCG CCCTCACGGG 
AAATCGGCCC TTTTCTCGAC GGAGGATTCG ATGCGACTGA GGGAATTCAT TTTGGAGAAC
GTCCAGCCGA TCCTCAGCGA GTGGGAGGCT TTCGCGGGGA GCCTCGCGCC GGGCGCGAAG
ATGACCAAGC TTGCGCTGCG CGATGATGCG GAGTCGATCC TTCTGGCGGC GGCGCGCGAC
ATGCAGGTCG GCCAGAGCGG CGTCCAACAG ACGAGCAAGT CTCAAGGGCA CGGTGGTGCT
GGCGGCGCGG AGAGCGAGCG GCTCGACGAC GCGTCGGCAC TGCACGGCGT CGGGCGCGCC
GGCTCGGGCT TCGACATCCT GGAGGTGGTC TCGGAATACC GCGCACTGCG CGCCAGCGTG
CTGCGCCTCT GGCGCGAGAG TCTCCCGCAG CCGGACATCG ACGACATCGA CGACATCACG
CGTTTCAACG AGTCGATGGA TCAGTCGCTC GCCACGGCCG TTGGCAGCTA CAGCAGGCGC
GTGGATCAGT CGCGCCGCAT GTTTCTCGCG GTCCTCAGCC ACGACCTGCG CAACCCGCTG
ACCTGCATCC GCATGGCCGC TCTGGTTATA TCGCGTAGTG CAGAGGGAAA CGCGAAGGCT
AGCCGCCTCC TGTCGCAGAT CGAGACGAAC GCGGACGCGA TCAGACGGCT GATCGACGAC
CTGATCGACT TCGCATCGAC CGGCCTCGGC AGCGCCATGC CCCTGACGCG CGGGCCGGTG
GATCTGGAAA GACTCGGCCG CGAAGTGGTC GACGCGTCTC GCACCGCGCA CCCCGGGCGC
ACGCTTCGCT TCCACGCCGA CGGCGATCTC GCCGGCCATT GGGATGCGGG CCGACTTCGC
CAGGTGGTCT CCAACCTGGT GGGCAACGCA CTGCAACACG GGTCTGAAAC AGGGGCAGTC
GGGCTGTCGC TCGCGTCAGA AGGGGCTACC GCCGTACTAG CCGTGCACAA CGAAGGCGCG
CCGATTCCGT CGGAGCTGTT GGCGACGATC TTCGATCCGC TGGTGCGCTA CGCGCCGGAC
GCGGCTGTGC GGCGCGTCCC GGGCAGCGTC GGGCTGGGCT TGTACATCGT GCGCGAGATC
GTCGTCGCGC ACGGGGGCAC CGTCGACGTC GTCTCGACAG CACAGGAAGG CACGACGTTC
ACGGCCCGGC TTCCGCGGGC GCAGCCTGCC GAAGACGACA AGCATGGCGA CACAAAGGCG
GCGGCAAGCG GCGGGGCGGC GTCGAATTGC GCTCTGCCCA CTCCGGGTCG ATCCGGCGCA
GGAAAGAGGT CAGCCGAGCG GTAG
 
Protein sequence
MTRTQAMAAR RNTGISRPHG KSALFSTEDS MRLREFILEN VQPILSEWEA FAGSLAPGAK 
MTKLALRDDA ESILLAAARD MQVGQSGVQQ TSKSQGHGGA GGAESERLDD ASALHGVGRA
GSGFDILEVV SEYRALRASV LRLWRESLPQ PDIDDIDDIT RFNESMDQSL ATAVGSYSRR
VDQSRRMFLA VLSHDLRNPL TCIRMAALVI SRSAEGNAKA SRLLSQIETN ADAIRRLIDD
LIDFASTGLG SAMPLTRGPV DLERLGREVV DASRTAHPGR TLRFHADGDL AGHWDAGRLR
QVVSNLVGNA LQHGSETGAV GLSLASEGAT AVLAVHNEGA PIPSELLATI FDPLVRYAPD
AAVRRVPGSV GLGLYIVREI VVAHGGTVDV VSTAQEGTTF TARLPRAQPA EDDKHGDTKA
AASGGAASNC ALPTPGRSGA GKRSAER