Gene Tbd_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2235 
Symbol 
ID3673925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2313456 
End bp2314829 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content64% 
IMG OID637710940 
Producthistidine kinase 
Protein accessionYP_315993 
Protein GI74318253 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG CCTCCGCCCG CCCCCCTATT CACGCGCTGC CGCGGCCATC CGAGGATTTG 
CGCGTCAGCA CGCATTTGTA TCTTGCAGCC GGCATGGCGC TGCTGATCGG CATGCTCGTC
GCGAGCTACA TGCAGGCCTC GGCGGGCCTC ACCGCGCTCA AGCAATTCGG CGTCGCCAAC
CAACGCGCCG ACCATCTCGA CCGCCTGAGC CAGCTCCTGC TCCATGCGCA GTCGGCGACG
CGCGGCTACG CGCTGACCGG CAGTCAGTCG CAGCTCGATT CCTATCGCGC GACCGTGCCC
CTGATCCAGG ACATCCTGCG CGTGATCGAG CGCGACCACG TCACGGAATC GCGCTCCGAC
ACCGCCCGCC TGGTACAGCT CGCGCACGGC GTCGCCGCGC GCCAGGAAAT CACGACGCGC
CACCTCGAAA GCGGCCTTCC GGCGAAGAAA ACTTGGTTCG AGGAAGGCAC GCTGGCGATG
GACGCCTACC TCCAGCAACA CAACAAGATC AAAGTCGATC TGCTCACCGA CAACCTGCAG
AACGTCCGCC AGTCGGTCAG CGGCTTCGAG ATGGCGCGCG TGAGCACGGT CCTGCTCGCG
ATTGCCTCCT TGCTGCTGCT GTTGCTGACG ATCTCGCAGC AGCAGAAGAA GCAGGAGCTG
CAAGCCAGGA TTCGTCACCT GCTCGAAGCG GAAAACGAAC GGCTCGATCA CGAGGTCCAG
CTGCGCACGG CCGAATTGAC GAATCTTGCG ACCTACCTCA CGGACGTGCG CGAGAGCGAG
AAACTGCATC TCGCGCGCGA ACTGCACGAC GAACTCGGCG CCCTGCTCAC CGCGGCCAAG
CTCGACGCGG ACTGGATCGA GCGCAAGCTG CCGCCGGAAA TGCGCGCCCT CGTCGAGCAG
CGGCTCACGC GTCTGCGCCA AAGCCTGGTC GGGGGGATCA CGCTCAAGCG ACGGATCACG
AACAACCTGC GTCCTGCGCT GCTCTATGAC CTCGGGCTGA TCGAGGCCCT CAAGTCGCTG
GTCGCCGAGT TCCGCGAGGA CGGCGAGGCG GATATCACCG CGGAACTTCC GGAAGACTGC
CCCGAACTCT CCGAAGAGGT GTCATTGAGC CTTTTTCGCA TCGTCCAGGA AGCGCTCACC
AATGTGCGCA AATACGCCCA GGCGAAGCAC GTACATATCG CACTACGGAC GAAGAGCGAC
GCGGTCGAGT TGTCGATCAC GGACGACGGC GTCGGCTTCG ACCCGCATTC GCCGAAAGTC
GCGCGCCACG GTCTCGCGGG AATCAAGCAT CGGGTGTTCG ACCACGGCGG CCAACTCGAT
ATTCGTACGG CGCCGGGAAA AGGCGTGGCG ATCAGCGTGA TGCTGCCGCT CTGA
 
Protein sequence
MPNASARPPI HALPRPSEDL RVSTHLYLAA GMALLIGMLV ASYMQASAGL TALKQFGVAN 
QRADHLDRLS QLLLHAQSAT RGYALTGSQS QLDSYRATVP LIQDILRVIE RDHVTESRSD
TARLVQLAHG VAARQEITTR HLESGLPAKK TWFEEGTLAM DAYLQQHNKI KVDLLTDNLQ
NVRQSVSGFE MARVSTVLLA IASLLLLLLT ISQQQKKQEL QARIRHLLEA ENERLDHEVQ
LRTAELTNLA TYLTDVRESE KLHLARELHD ELGALLTAAK LDADWIERKL PPEMRALVEQ
RLTRLRQSLV GGITLKRRIT NNLRPALLYD LGLIEALKSL VAEFREDGEA DITAELPEDC
PELSEEVSLS LFRIVQEALT NVRKYAQAKH VHIALRTKSD AVELSITDDG VGFDPHSPKV
ARHGLAGIKH RVFDHGGQLD IRTAPGKGVA ISVMLPL