| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2230 |
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| Symbol | cbbE |
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| ID | 3673920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2309929 |
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| End bp | 2310612 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710935 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_315988 |
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| Protein GI | 74318248 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.375841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTACC GCATCGCCCC GTCCATTCTG TCCGCCAACT TCGCCCGCCT AGGCGAGGAG
GTCGACAACG TGCTCGCGTC CGGCGCCGAC ATCGTTCATT TCGATGTCAT GGACAACCAT
TACGTGCCCA ACCTCACGAT CGGCCCGCTG GTGTGCGAAG CGCTGCGCAA GCACGGCGTC
ACCGCACCGA TCGACGTGCA TCTCATGGTC AAGCCGGTCG ACCGCATCAT TCCCGACTTC
GCCAAGGCCG GCGCGACCTA CATCACCTTC CACCCCGAAG CGTCGGAGCA CATCGACCGC
ACCATCGGAC TGATCAAGGA AAACGGCTGC AAGGCCGGCC TCGTCTTCAA CCCCGCGACG
CCGCTCGACG TGCTCGAATA CACGCTCGAC AAGCTCGACA TGGTGCTCCT GATGAGCGTG
AACCCTGGCT TCGGCGGGCA GAAGTTCATC CCCTATGTGC TCGACAAGGC GCGCGCCGTG
CGCAAGATGA TCGACGACCG CGGCCTCGAC GTGAGCCTCG AGATCGACGG CGGCGTGGGC
CCGGCCAACA TCGCCGAAGT CGCGCGCGCC GGCGTCGACA CCTTCGTCGC CGGCTCGGCC
GTGTTCGGCG CGGCCAAAGA GGGCGACCCG CAGCGCTATA ACAGCATCAT CGCCGCGATG
CGCGCGGAGT TGGCGAAAGT GTAA
|
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| Protein sequence | MTYRIAPSIL SANFARLGEE VDNVLASGAD IVHFDVMDNH YVPNLTIGPL VCEALRKHGV
TAPIDVHLMV KPVDRIIPDF AKAGATYITF HPEASEHIDR TIGLIKENGC KAGLVFNPAT
PLDVLEYTLD KLDMVLLMSV NPGFGGQKFI PYVLDKARAV RKMIDDRGLD VSLEIDGGVG
PANIAEVARA GVDTFVAGSA VFGAAKEGDP QRYNSIIAAM RAELAKV
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