| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2227 |
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| Symbol | |
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| ID | 3673917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2306178 |
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| End bp | 2307470 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637710932 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_315985 |
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| Protein GI | 74318245 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.494043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCA TCGAACTGCA GGACATCATC GACGCGAACG ACCAGCCTTT CGTCGTGATC
GACAGCGCAT ACCGCATCGT CGCGGCCAAC CGGCGCTACG CGGAAACCTA TGGCGCGACG
CCCGAGGCGA TCGTCGGCGA GCACTGCTAC GCCGTGTCTC ACCACTCGCC GCGGCCCTGC
CACGAAAACG GCGAGCAATG CCCGCACCGC GCCCTGTTCG AGAACGGCGA GGCGGTCGAG
GTCGTGCACA CGCACTTTCA TGCCAACGAT CAGCCCGAGC GCACTCGCAT CCGCGGCCAC
GCGCTGCGCG GCCCGGACGG CGAGCGCTAC CTGGGCGAGC AGCTCTACCC GCTCGAAGCC
GACATCGGCC TGGATTGCGA CGCCATGCAG ATGGTCGGGC AGTCCCCGGC GTTTCTCGCG
TGCGTCGACA ATCTCGCGCG CGTCGCCGAA AGCGAAGCGT CGATCCTGCT GTATGGCGAA
AGCGGCGTCG GCAAGGAACT CGCCGCGCGC TTCATCCATG CTCGCTCGCA GCGCAGGGGC
GGCGCCTTCA TCGTGATCAA CTGCGCCGCG GTGCCCGAAA CCCTGTTCGA AAGCGAGCTG
TTCGGCCACG AACGCGGCGC GTTCTCGGGC AGCAGCGGCC TCAAGAAAGG CCTGTTCGAA
CTCGCCGACG GTGGCACGCT ATTCCTCGAC GAGGTCGCGG AGATCCCGCT GGCGCTGCAG
GCCAAGCTGC TGCGCGTACT GGAGACCGGG GAATTCCGCC GTGTCGGCGG CACCCACACG
CTGACCGCGG ACGTGCGGCT GGTGTCGGCG ACCAACCGCC GCCTGCTGGA CGAAGTCGAC
GAAAAGCGCT TCCGGCTCGA CCTCTACTAC CGGCTGGCCG GCATCGACGT CGTGCTGCCG
CCGCTGCGCG AGCGCCGCGC CGACCTGCCC GCGCTGGCCG CCTTCCTGCT CAAGCGACTG
GCCGGCGGCC GCCGAGCCTG CCGGCTCGAC GCGAGCGGAC TGGCGGCGCT GCAGGCCTAC
GATTTTCCGG GGAACGTGCG CGAACTGCGC AACCTGCTGC AGCGCGCGGT GCTGACCTGC
CGCGACGGCG TGATCGGCGC CGCCGATCTG AACCTGCCCG TCGCCGCCGT GACGCCGGTC
CAGCCGGCGA CGCAGGGGCT CGCCGACATC GAGCGCGCGC ACATTCGCGC GCTGCTCGCC
AGCCGCGGCG GCCACCGCGG ACGGGTCGCC CAGGCACTCG GCGTCACCGA GCGCACGCTG
TACCGCAAGC TCAAACGCTA CGGCCTGAGT TAG
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| Protein sequence | MPSIELQDII DANDQPFVVI DSAYRIVAAN RRYAETYGAT PEAIVGEHCY AVSHHSPRPC
HENGEQCPHR ALFENGEAVE VVHTHFHAND QPERTRIRGH ALRGPDGERY LGEQLYPLEA
DIGLDCDAMQ MVGQSPAFLA CVDNLARVAE SEASILLYGE SGVGKELAAR FIHARSQRRG
GAFIVINCAA VPETLFESEL FGHERGAFSG SSGLKKGLFE LADGGTLFLD EVAEIPLALQ
AKLLRVLETG EFRRVGGTHT LTADVRLVSA TNRRLLDEVD EKRFRLDLYY RLAGIDVVLP
PLRERRADLP ALAAFLLKRL AGGRRACRLD ASGLAALQAY DFPGNVRELR NLLQRAVLTC
RDGVIGAADL NLPVAAVTPV QPATQGLADI ERAHIRALLA SRGGHRGRVA QALGVTERTL
YRKLKRYGLS
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