Gene Tbd_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2225 
Symbol 
ID3671984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2304501 
End bp2305769 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content63% 
IMG OID637710930 
Productsulfide-quinone reductase 
Protein accessionYP_315983 
Protein GI74318243 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.659871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA TCGTAATACT CGGCGCCGGC GTCGGCGGCA TGACCATGGC GTATGAAATG 
CGCGAGTCGG CACGGGCCGA GGACAAGGTC ACCGTCATTT CCAACAATTC GTACTTCCAG
TTCACGCCGT CCAACCCCTG GGTGGGGGTG AACTGGCGCA AGCGTGACGA CGTCACGCTC
GAGGCCGCGC CTTACCTCAA CAAGAAAAAC ATCGACTTCA TTCCGGTCGG CGCCGCGCGC
GTGCATCCCG ACAGGAACCA GATCGACCTC ACCGACGGCA GGACCGTCGA CTATGACTTC
CTCGTCATCG CGACGGGGCC CAAGCTCGCG TTCGACGAAG TCCCGGGCCT CGGCCCCGAG
GGTTACACCC AGTCGGTATG CACGGTCGAC CATGCCCAGG CCGCGGGCCG CGCGTGGGAC
GATTTTGTGA AGAACCCGGG GCCGATCGTG GTCGGCGCGG TGCAGGGGGC TTCCTGCTAC
GGCCCGGCGT ACGAGTACGC GATGATCATG GACACCGACC TGCGCAAGCG CAAGATTCGT
GACCGCGTGC CGATGACCTA CGTCACGGCC GAGCCGTATA TCGGCCATCT GGGACTGGGC
GGCGTCGGCG ATTCCAAGGG CATGCTCGAA TCGGTCCTCC GCGAGCGCCA CATCAAGTGG
ATCTGCAACG CCAAGGTCAC CAAGGTCGAG GCTGGCAAGA TGTTCGTCGC CGAGCACAAC
GACAAGGGCG AAGTGATCAA GGAGCACGAA CTGCCGTTCG GCTACTCGAT GATGCTGCCG
GCGTTCAAGG GCATCGATGC TGTGTTCGGC ATCGAGGGGC TGACCAATCC GCGCGGCTTC
ATCACGATCG ACCCCTACCA GCGCAACGCG AAGTACCCGA ACGTCTACTC CGTCGGCGTG
TGCGTCGCGA TCCCACCCGT CGAGGTCACT CCCGTGCCGA CCGGCACGCC GAAGACCGGC
TACATGATCG AATCGATGGT GACGGCGACC GCGCACAACA TCCGCGCCGT GCTCGACGGC
CGCGAGCCTG CCGAGAAGGC GACCTGGAAC GCGATCTGCC TCGCCGACTT CGGCGACACC
GGCGCCGCCT TCGTGGCCCT GCCGCAGATT CCGCCGCGCA ATGTCAACTG GTTCAAGGAA
GGCAAGTGGG TGCATCTGGC CAAGGTCGCC TTCGAGAAGT ACTTCATCCG CAAGATGAAA
AAAGGCTCGA CCGAGCCGCT GTACGAGAAG TACGTGCTCG GCCTCATGGG CATCAAGAAA
CTCAAGTAA
 
Protein sequence
MAHIVILGAG VGGMTMAYEM RESARAEDKV TVISNNSYFQ FTPSNPWVGV NWRKRDDVTL 
EAAPYLNKKN IDFIPVGAAR VHPDRNQIDL TDGRTVDYDF LVIATGPKLA FDEVPGLGPE
GYTQSVCTVD HAQAAGRAWD DFVKNPGPIV VGAVQGASCY GPAYEYAMIM DTDLRKRKIR
DRVPMTYVTA EPYIGHLGLG GVGDSKGMLE SVLRERHIKW ICNAKVTKVE AGKMFVAEHN
DKGEVIKEHE LPFGYSMMLP AFKGIDAVFG IEGLTNPRGF ITIDPYQRNA KYPNVYSVGV
CVAIPPVEVT PVPTGTPKTG YMIESMVTAT AHNIRAVLDG REPAEKATWN AICLADFGDT
GAAFVALPQI PPRNVNWFKE GKWVHLAKVA FEKYFIRKMK KGSTEPLYEK YVLGLMGIKK
LK