Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2211 |
Symbol | ruvB |
ID | 3671602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2289661 |
End bp | 2290686 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637710916 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_315969 |
Protein GI | 74318229 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00690451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGAAA CCGACCGCCT TATCGTACCG ACCGCCGTCG GCCCGCAGGA AGAGCAGATC GAGCGCGCGC TGCGTCCGCG CACGCTCGCC GAATACGTGG GCCAGGCCAA GGCGCGCGAG CAGCTCGAGA TTTTCATCCA CGCCGCGAGA AAGCGCAGCG AGGCGCTCGA CCACGTCCTG CTGTTCGGCC CGCCGGGGCT CGGCAAGACG ACGCTCGCGC ACATCATCGC GCGCGAAATG GGGGTCAACC TGCGCCAGAC TTCGGGTCCG GTGCTCGAGC GCGCCGGCGA CCTCGCGGCG CTGTTGACCA ACCTCGAACC GCACGACGTG CTGTTCATCG ACGAGATCCA CCGTCTCTCG CCCGTAGTCG AGGAAGTGCT CTATCCCGCG CTCGAGGATT TCCAGATCGA CATCATGATC GGGGAGGGAC CGGCGGCGCG CTCGGTCAAA CTCGACCTGC CGCCGTTCAC GCTCGTTGGC GCGACGACGC GCGCAGGCAT GCTGACCAAC CCCCTGCGCG ACCGTTTCGG CATCGTCGCG CGGCTCGAGT TCTATTCGGC CGAGGAGCTC GGCTACATCG TCCACCGTTC GGCCGGTCTG CTGCAGATGA ACCTCGACGA GGCCGGCGCG CTCGAGATCG CGCGGCGCTC GCGCGGAACG CCGCGCATCG CCAACCGCCT GCTGCGGCGC GTCCGTGACT ACGCGGAGGT CAAGGCGGGC GGAGAGGCGA CCGGCGCGGT CGCCGATGCC GCCCTGGTGA TGCTCGACGT CGACCGCGCC GGGCTCGACG TCATGGACCG CAAGCTGCTC GGCGCCGTGG TCGAGAAATT CATGGGCGGA CCGGTCGGTC TCGACAATCT CGCGGCCGCG ATCGGCGAAG AGCGCGACAC GATCGAGGAC GTGCTCGAAC CCTATCTCAT CCAGCAGGGC TATCTGCAGC GCACGCCGCG CGGCCGGGTC GCGACGCCGC TGGCTTACCG GCATCTCGGG ATCGCCACGC CCGCCAGCGA CGCCGAACTC TTCTGA
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Protein sequence | MIETDRLIVP TAVGPQEEQI ERALRPRTLA EYVGQAKARE QLEIFIHAAR KRSEALDHVL LFGPPGLGKT TLAHIIAREM GVNLRQTSGP VLERAGDLAA LLTNLEPHDV LFIDEIHRLS PVVEEVLYPA LEDFQIDIMI GEGPAARSVK LDLPPFTLVG ATTRAGMLTN PLRDRFGIVA RLEFYSAEEL GYIVHRSAGL LQMNLDEAGA LEIARRSRGT PRIANRLLRR VRDYAEVKAG GEATGAVADA ALVMLDVDRA GLDVMDRKLL GAVVEKFMGG PVGLDNLAAA IGEERDTIED VLEPYLIQQG YLQRTPRGRV ATPLAYRHLG IATPASDAEL F
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