Gene Tbd_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2210 
Symbol 
ID3671601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2289257 
End bp2289658 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID637710915 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_315968 
Protein GI74318228 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00606387 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTTTC GCTGGCCCAT CCGCGTGTAC TGGGAAGACA CCGACGCCGG CGGGGTCGTC 
TACTACGCGA ATTATCTGAA ATTCATGGAG CGGGCGCGCA GCGAGTGGCT GCGTGCGCTC
GGTTTCGAGC AGGACATGCT GCGCGACGCG CAGGGAATCG TCTTCGTCGT CCGCCGGGTC
GAGATCGACT ACCTGTCGCC GGCGCGCTTC AACGACGCGC TCGAGGTCTC GGCCGTCCTG
CACAGCGCGG GCCGCGCGAG CCTGACGGTG CGCCAGGAAC TCATGCGCGG CACGCAGCGT
CTAGCTGAGG CCGTGGTGAC GCTGGCCTGC GTCGACGTCG CGAATTTCAA ACCCGTTAAA
ATGCCCGCAA CGATACTTCA AGCCCTGAGC CCCACGCCGT GA
 
Protein sequence
MTFRWPIRVY WEDTDAGGVV YYANYLKFME RARSEWLRAL GFEQDMLRDA QGIVFVVRRV 
EIDYLSPARF NDALEVSAVL HSAGRASLTV RQELMRGTQR LAEAVVTLAC VDVANFKPVK
MPATILQALS PTP