Gene Tbd_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2207 
Symbol 
ID3671598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2287280 
End bp2288152 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID637710912 
Productputative TonB protein 
Protein accessionYP_315965 
Protein GI74318225 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00259099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGCG GCGACGGGCG TTTCGTCTCC CGCCCCGTGC CGAGGCTCGC CGCGGGACTT 
CTCGCGCTCG GCGTGCACCT GCTCTTCGTG TTGCTGCTCG TGTTCGGCGT GTCGTGGCAG
ACGCGGCATC CCGCGCCGGT AACGGTCGAC CTCTGGGAAT CGATCCCGCA ACCGCCGGCA
CCCCGTCCAC CCGTGCCGGC GCCGCCCCCG CCCGAGCCGC CGCAGCCCGC GCCGCGGCCG
GTCCCCGAAC CCGAAGTGAA GAATGAGCCC CCGCCGCCGA AGGCGCCCGA CATCGCGCTC
GAGAAGAAAA AGGCCGCGGC GGCGAAGGCG GCCGCGCTGG AAAAAGCCGC ATTAGAAAAA
GCGGCGCAGG AAAAGGCAGC GCAGGAAAAG GCAGCGCAGG AAAAGGCAGC GCAGCAAAAA
GCTGAACAGG AAAAGGCCGC CGCGCAGAGA AAACGCGACC TGCTGCGGCA GATGGAGGAA
GAGGACGCGA TACGGCGGAT GGCCGACGAA GAGGCGGCGA ATCAGGCGCG TCTGCTGAAG
CAGGCGGAAG CGAAAGCGGC CGCCGGCGCG CGGCAGAGCG AAATCGCCCG TCTCGTCGGG
CAGCATCGCG ATCTCATCAG CGCCAAGGTG CGCGGCAATA CGCGCCTGCC CGACAACCTG
GCCGGCAATC CCGAAGTGCG ATGCCTGGTC AGGCTGCTTC CGACAGGCGA AGTGCAGAGC
GTGCGGGTGA CGCGTTCGAG CGGCAACCCC GCGTACGACG ACGCCGTCAA GCGCGCGATC
GAGAAATCCT CGCCTTTGCC CTTGCCCGCC GACCGCGATG CGCGGGCCGA GTTCGTGCCG
GAACTTTCCT TCGTACATCG CCCTAAGGAG TGA
 
Protein sequence
MTRGDGRFVS RPVPRLAAGL LALGVHLLFV LLLVFGVSWQ TRHPAPVTVD LWESIPQPPA 
PRPPVPAPPP PEPPQPAPRP VPEPEVKNEP PPPKAPDIAL EKKKAAAAKA AALEKAALEK
AAQEKAAQEK AAQEKAAQQK AEQEKAAAQR KRDLLRQMEE EDAIRRMADE EAANQARLLK
QAEAKAAAGA RQSEIARLVG QHRDLISAKV RGNTRLPDNL AGNPEVRCLV RLLPTGEVQS
VRVTRSSGNP AYDDAVKRAI EKSSPLPLPA DRDARAEFVP ELSFVHRPKE