Gene Tbd_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2201 
Symbol 
ID3671592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2281645 
End bp2282907 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content64% 
IMG OID637710906 
Producttransmembrane protein 
Protein accessionYP_315959 
Protein GI74318219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000866574 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTATG AAGATTTCGC AAGCGCCCAA TCGTTCTTAC TGTGGTCGAC CTTCGCGGTC 
GCCCTCGTCA TGGGCGCGGT CGTCAACAAG ACCAATTTCT GCACCATGGG CGCCGTGTCC
GACTGGGTCA ACATGGGCGA CACCGGACGC ATGCGCGCCT GGGTCCTCGC GATCGCGGTC
GGCGTGCTCG GCGTCATGGG CCTCGAGGCC GCCGGTCTCG TGAATGTCAC GAATACCTTC
CCACCGTACC GCCAGAACAA TTTCCCCTGG CTCGAAAACC TGCTCGGCGG CGCGCTCTTC
GGAATAGGCA TGGTGCTCGC CTCGGGTTGC GGCAACAAGA CCCTGGTCCG CATCGGCGGC
GGCAACCTCA AGTCGGTCAT GGTGTTCCTG GTCATCGCCG TGATCGCCTA TTTCATGATC
AACCCCTTCC CGGGCAGCGA CAAGACCCTG TACTCGACGC TGTTCTACGG CTGGACCAAC
CCGACCGCCG TCTCCTTGAC CACCAACCAG GATCTCGGCG CGATGCTGTT CGCGGAGAAC
GCCGACACCG GCCGCATGGT CATGGGCGCG GTCATCGGCG GCCTGCTGCT GATCTGGGCG
TTCAAGTCGG CCGAATTCCG CAGCAGCTTC GACAACATCC TCGGCGGCCT CGTCGTCGGC
CTCGCCGTGC TTGCGGCCTG GTATATCACG AGCAACGTCA TGGTCGACGC TGACGGCGAG
ATCATGTCGC TGCAGACCTA CGTGCAGGAC TGGGACCTCT ACGCGCCCGC CGATGCGGTT
CGCCCCGCCG CCGCCGGCCC GCTCGCCTCG CAGTCGTTCA CCTTCATCAA CCCGATGGGC
CAGTCTCTTG GCTACGCGAC CAACGGCTTC GACCGCACTC TGCTCACCTT TGGCATCATG
GCGCTCGCCG GCGTCGTCGC CGGCTCGCTG CTGTGGGCGC TCATTTCGCG CAGCTTCCGC
TTCGAATGGT TCGCCTCGGT GCGCGACTTC TTCAATCATC TCGTCGGTGC AGTCCTCATG
GGCTTCGGCG GCGTTCTCGC CATGGGCTGC ACGATCGGTC AGGGCGTCAC GGGCTTCTCC
ACCCTGGCGA TCGGGTCCAT TCTGACCTTC GTCGCGATCG TGCTTGGCAG CGCCGTGACG
ATGAAAGTGC AGTACTACAA GATGGTGTAC GAGAGCGAGG CGACCTTCCT CAAGGCCTTC
GTCACCGCGC TCGCCGACCT TCGGCTGCTG CCGGCCGGAA TGCGCAAGCT GGAAGCGGTT
TAA
 
Protein sequence
MTYEDFASAQ SFLLWSTFAV ALVMGAVVNK TNFCTMGAVS DWVNMGDTGR MRAWVLAIAV 
GVLGVMGLEA AGLVNVTNTF PPYRQNNFPW LENLLGGALF GIGMVLASGC GNKTLVRIGG
GNLKSVMVFL VIAVIAYFMI NPFPGSDKTL YSTLFYGWTN PTAVSLTTNQ DLGAMLFAEN
ADTGRMVMGA VIGGLLLIWA FKSAEFRSSF DNILGGLVVG LAVLAAWYIT SNVMVDADGE
IMSLQTYVQD WDLYAPADAV RPAAAGPLAS QSFTFINPMG QSLGYATNGF DRTLLTFGIM
ALAGVVAGSL LWALISRSFR FEWFASVRDF FNHLVGAVLM GFGGVLAMGC TIGQGVTGFS
TLAIGSILTF VAIVLGSAVT MKVQYYKMVY ESEATFLKAF VTALADLRLL PAGMRKLEAV