| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2200 |
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| Symbol | |
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| ID | 3671590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2280878 |
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| End bp | 2281213 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637710904 |
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| Product | pilus assembly protein PilA |
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| Protein accession | YP_315958 |
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| Protein GI | 74318218 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.360457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000654211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGCAAGA TTCAAAAAGG CTTCACCCTG ATCGAACTGA TGATCGTCGT GGCGATTATC
GGTATTCTGG CCGCCGTGGC CATTCCTGCT TACAGTCAGT ATGTCGACAA GTCGAAGGTC
AGTGCCTGCA AGGCCGAGGC TGTGGCTTAC GCCCGTATCG CCCTCGCCGA AGCATCCCAG
AACAACTCGA TTCCCGCTGC CAACGTGGCA GCCTGTGCGA CTATCGACGA CACCACGGCG
GGCAAGAATA AAACGGTCTA TGCGGCCTTT ACCGCGACTG CAAAGGACAG CAAACCCACC
ACTATTAGCT GCGATGCCAA CGCCAACTGT AAGTAA
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| Protein sequence | MRKIQKGFTL IELMIVVAII GILAAVAIPA YSQYVDKSKV SACKAEAVAY ARIALAEASQ
NNSIPAANVA ACATIDDTTA GKNKTVYAAF TATAKDSKPT TISCDANANC K
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