| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2199 |
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| Symbol | |
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| ID | 3671589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2279045 |
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| End bp | 2280712 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637710903 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_315957 |
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| Protein GI | 74318217 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00873535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000489477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGATAT TCTATGAGGT GAATATGATC GATCGCCTAA AAGGACTGAT CCCGTTTCTA
CTGCTAGGTG CGACTTTCGC CCTGTACTGG CCTTCGCTCG ACTATGCGCC TTTTTTTGAC
GATACGAATT TCTTCGAGCG AGGGGGACTT GATAAGGTTT TCCTGAACGG CTTCTCGTTT
GCGCCTCGAT GGCTCCCTTA TTTCATGACG GCCTGGGTCG ACCTGATTTT TGAAGACCCT
CTATTCGTCC AGCGCTTTCT GAACGTATGC CTGCATCTGG CTACGGCTTT TGTGCTGCAC
AAGCTTATTC GGCAGGTGGC GGATCATGTT GCTCCGCATC CAAACAATAG ACGCGCCGCC
TTGGCGGCGG CCTTGCTCTT CTTGCTGCAT CCGGCAGCTG TCTACGCGGT CGGGTACCTG
ATCCAGCGAA CAATCCTGAT GGCCACGCTG TTCGGCCTGT TGGCGTTGAG CGCGTATTTC
GACGGTCTGG TGACGCGCAA GAAAGCGTTT TTCATTTTTT CTGCCTTCTT TTATTTGCTT
TCGAGTTTCA GCAAGGAACA CGCGGTCACG ATCCCTGCTG CGGCGCTGGC GCTGACGACA
TTGGCGGCGC CGCTGACGCG GCAGACGATG CGTCGGCTGA TACTGCCGGC AGCCCTGTAC
CTGGGGATCG CGATCCTGGT TGTGGTCAAG ATGCGCGGTC TCCTCGGGAC CACCTATGAG
CCTTTCGCGG CAGCGCTCGT GCACCAGCAG GGTGGAAGCG AGAGCGTGCC GTCCTTGTGG
GCACTGAGCG CCCTGACCCA AGCCTCGCTT TTTTTCAAAT ACCTCGGTCT GATGCTCATG
CCTTATCCGG GCTGGATGTC CATCGACATA CGCGTTCCCT TTGCACAGCA TTTTGCGCAG
CCAAAGTACT TGGTGGGCCT CTTCGCGCTA GCCACGTACG CCTTGACTAC GCTGGTCTGG
CTGCTGAAGG GGGGACGGCG CGGTCTTGTG GGATACGCGC TATTGGCACC TTTGCTTCTG
TTCGTAGTCG AGTTTTCGAC CGTGAAAATC CAGGAGCCCT TCGTGCTTTA CCGGTCCTAT
TTATGGCTGG CGCCATTGTT TATCGCGATG CCCGTGCTCA CTTATAGGCT TTCCAACGGT
ATGTTTTGGT CGTTGGCCTT GAGCGTCGCA CTGGCTTTCG CGTGGGTGTC CAGTGACCGG
CTTCAGACTT TTTCCAGTAC CTATGCGCTA TGGGACGATG CGGCGAAAAA ATTGCCGGAC
GAGCGGGTGC TGGGCTCGGC GCGTGTATAC GCGAATCGCG GCGGGCTGCG AATGGAGCGT
GGCGATTTCG GTGGTGCGGT GGATGACTTT ACCCGAGCGT TGCGGGCAGA TCCCGGGTAT
CGGGAGGCGC TCAAGGGACG GGCGTTCGCA CACATGAAGC GCGGAGACCA CTCGCGCGCG
CTTGCCGATG CGACGGCCTT GATCCGGCTT GACCCAAGCA GACGGGACAG TTATATCGCG
CGCGGGCACG TTTACAAGGA TCAAGGTGAC TGGCGGCTGG CAAAGGCTGA CTTCGAATAC
GGCTGCGCTG GAATGCGATT TCCAGCTGCT TGCATGGCCG TTCTCACGCG AGACTCCGAG
AAGAGCGACC CTGCTGCCCA ACGTGGGAAG CCGTTAGGGG AGGTCTAG
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| Protein sequence | MPIFYEVNMI DRLKGLIPFL LLGATFALYW PSLDYAPFFD DTNFFERGGL DKVFLNGFSF
APRWLPYFMT AWVDLIFEDP LFVQRFLNVC LHLATAFVLH KLIRQVADHV APHPNNRRAA
LAAALLFLLH PAAVYAVGYL IQRTILMATL FGLLALSAYF DGLVTRKKAF FIFSAFFYLL
SSFSKEHAVT IPAAALALTT LAAPLTRQTM RRLILPAALY LGIAILVVVK MRGLLGTTYE
PFAAALVHQQ GGSESVPSLW ALSALTQASL FFKYLGLMLM PYPGWMSIDI RVPFAQHFAQ
PKYLVGLFAL ATYALTTLVW LLKGGRRGLV GYALLAPLLL FVVEFSTVKI QEPFVLYRSY
LWLAPLFIAM PVLTYRLSNG MFWSLALSVA LAFAWVSSDR LQTFSSTYAL WDDAAKKLPD
ERVLGSARVY ANRGGLRMER GDFGGAVDDF TRALRADPGY REALKGRAFA HMKRGDHSRA
LADATALIRL DPSRRDSYIA RGHVYKDQGD WRLAKADFEY GCAGMRFPAA CMAVLTRDSE
KSDPAAQRGK PLGEV
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