| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2195 |
|---|
| Symbol | |
|---|
| ID | 3672329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2275602 |
|---|
| End bp | 2276099 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637710899 |
|---|
| Product | CinA protein |
|---|
| Protein accession | YP_315953 |
|---|
| Protein GI | 74318213 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000407296 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000443632 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTG TGAGCGACGA AGAACTACAC CACCTCGCGG TCGAATTGAG CGAGAAGCTG
CGCGCGCGCG GCTGGATGCT CGCCACTGCC GAATCCTGCA CCGGCGGCTG GGTCGGGCAG
TTGCTGACCT CGCTGCCCGG CAGTTCGCAC TGGTACGAGC GCGGCTTCAT CACCTACGCC
AACGCCGCGA AGGTCGAGAT GCTCGGCGTG CCAGCCGATC TGCTCGAGCG CCACGGCGCC
GTCTCCGAGG AGATCGCGAG CGCAATGGCC GCAGGTGCCT TGACGTACAG CCACGCGCAG
GCGGCGCTCG CGGTTTCCGG CATCGCCGGC CCCGGGGGCG GCACGCCGCA GAAACCCGTC
GGCCTCGTGT GTTACGGCTG GGCGCTCGCC GACGGCACGG TCATGTCGTC GACCTGCCGC
CTCGACGGCG ACCGCGAGGA GATCCGTTCG CGCGCGGTCG CCGCGTCGCT GCGCGGGTTG
ATTGAGCTGG TGGGATGA
|
|---|
| Protein sequence | MARVSDEELH HLAVELSEKL RARGWMLATA ESCTGGWVGQ LLTSLPGSSH WYERGFITYA
NAAKVEMLGV PADLLERHGA VSEEIASAMA AGALTYSHAQ AALAVSGIAG PGGGTPQKPV
GLVCYGWALA DGTVMSSTCR LDGDREEIRS RAVAASLRGL IELVG
|
|---|
| |