Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2182 |
Symbol | |
ID | 3671963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2265058 |
End bp | 2266302 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710886 |
Product | putative dioxygenase related to 2-nitropropane dioxygenase |
Protein accession | YP_315940 |
Protein GI | 74318200 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000148707 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000279866 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAAACGCG TCGATGATTT CCGCCTCAAT TTCGGCAACA AAGAACTGGT GCCGATCGTC ATCGGCGGGA TGGGGGTCGA CATCTCGACC GCGGAACTCG CGCTCGAAGC CGCCCGCCTC GGCGGCATCG GCCACATTTC CGACGCGATG GTGCAGACCG TCTCGGACCG GCGCTTCGAC ACCAACTTCG TCAGCCAGAA GCTCAAGACC TACAAGGCCA ACGTCGCGAG CAGCGACAAA TCCGAGGTGC ACTTCAATCT CGGCGTGCTC GAGGAAGCCA CGCGCAATCA CGTCGGCCGC ACGATGGACG CCAAGCGCGG CGACGGCATG ATCTTCATCA ACTGCATGGA GAAGCTGACG ATGAACGCGC CGCGCGAGAC GCTGCGCGTT CGCCTGTCGG CCGCACTCGA CGCGGGGATC GACGGCATCA CGCTCTCCGC GGGTCTGCAT CTCGGCTCGT TCGCGCTGAT CGAGGACCAT CCGCGCTTCC GCGACGCGCG GCTCGGCATC ATCGTCTCGT CGCCGCGCGC GCTCGCGATG TTCCTGCGCA AGAACGCGCG CCTGCAGCGC CTGCCCGACT TCGTCGTGGT CGAGGGCCCG CTGGCCGGCG GCCATCTCGG CTTCGGCCTC GACTGGGCGC AGTACGAGCT CGCGACGATC GTCGCCGAGG TGCAGGCCTA TCTGCAGAGC GAACACCTGG ACATCCCGGT CATCGCCGCG GGCGGGATCT TCACCGGCAG CGACGCCGCG GCCTTTCTCG AGCAGGGCGC CGCGGCGGTG CAGGTCGCCA CGCGTTTCAC CGTCACGCGC GAATGCGGCC TGCCCGACAA GGTCAAGCAG GAGTACTTCA AGGCGAGCGA GGAAGACATC GAGGTCAACA CGATCTCGCC GACCGGCTAT CCCATGCGCA TGCTCAAGGG CAGCCCGGGA ATCGGCGCCG GCATCCGCCC GAATTGCGAG GCCTACGGCT ACCTGCTCGA TGCCAACGGC CGCTGCGCCT ACATCGACGC GTACAACCGC CAGGTCGAAC TGCAGCCCGA CGCGAAGAAA ATTTCGGTCA TGGAAAAAAC CTGCCTGTGC ACGCACATGC GCAACTTCGA CATCTGGACC TGCGGGCAGA CCGCCTATCG GCTCAAGGAC ACCACCACGC GTGCCGACGA CGGCAGCTAC CGGATCCTGA GCGCCGAGCA CGTATTCAAC GACTATCAAT TCAGCGTCGA CGACAAAGTC GCGCTGCCTG CCTGA
|
Protein sequence | MKRVDDFRLN FGNKELVPIV IGGMGVDIST AELALEAARL GGIGHISDAM VQTVSDRRFD TNFVSQKLKT YKANVASSDK SEVHFNLGVL EEATRNHVGR TMDAKRGDGM IFINCMEKLT MNAPRETLRV RLSAALDAGI DGITLSAGLH LGSFALIEDH PRFRDARLGI IVSSPRALAM FLRKNARLQR LPDFVVVEGP LAGGHLGFGL DWAQYELATI VAEVQAYLQS EHLDIPVIAA GGIFTGSDAA AFLEQGAAAV QVATRFTVTR ECGLPDKVKQ EYFKASEEDI EVNTISPTGY PMRMLKGSPG IGAGIRPNCE AYGYLLDANG RCAYIDAYNR QVELQPDAKK ISVMEKTCLC THMRNFDIWT CGQTAYRLKD TTTRADDGSY RILSAEHVFN DYQFSVDDKV ALPA
|
| |