Gene Tbd_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2178 
Symbol 
ID3671959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2262042 
End bp2262587 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID637710882 
ProductTetR family transcriptional regulator 
Protein accessionYP_315936 
Protein GI74318196 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000638624 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000363527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATCA TCCGCCACGA AGGCGTCGCC AAGCTCACCA CGCGCTCGCT GTCGCAGGCG 
GTCGGCATCG CGCAGCCGAC GCTGTTTCTC CACTTCGGCA GCAAGAGCCA CGTCCTCGTC
GCGCTGATCG ACACCATCCA GGAGCGCCTG CAGCAGGAAA TGGCGGGCCT CGGCCTTGCC
CGGCTGCCGC CGCTCGAGCG CTTGAAGGCC GTGATCCGCG CGCACCTCAA TTTCATCCAG
CGCCAGCCCG GGATCCCGCG CCTGCTGTTC TCGGAGGAAC TGCAAAGCGG CGATCCGGTG
TTTCGCGCGC GCATGAACGG TCTCGTGCAG TTCTTTCTCG GCTTCATCGC CGACCTGATC
GCCGCCGCGC AGGCCGAAGG CGAGATCCGG CCCGAAATCG TTCCGCAGCA GAACGCCTGC
ATCCTGATCG CGGCCGTTCA GGGGCTCGCA TTTCGCTGGG TGCTTTCGGA CAATCGCTTC
GAACTGAGCG AGCAGGCCGA CGCCGTCATC GCGACCTTCA TCGACGGCTG GGCCGCGCGC
CCCTAG
 
Protein sequence
MEIIRHEGVA KLTTRSLSQA VGIAQPTLFL HFGSKSHVLV ALIDTIQERL QQEMAGLGLA 
RLPPLERLKA VIRAHLNFIQ RQPGIPRLLF SEELQSGDPV FRARMNGLVQ FFLGFIADLI
AAAQAEGEIR PEIVPQQNAC ILIAAVQGLA FRWVLSDNRF ELSEQADAVI ATFIDGWAAR
P