Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2178 |
Symbol | |
ID | 3671959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2262042 |
End bp | 2262587 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710882 |
Product | TetR family transcriptional regulator |
Protein accession | YP_315936 |
Protein GI | 74318196 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000638624 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000363527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGATCA TCCGCCACGA AGGCGTCGCC AAGCTCACCA CGCGCTCGCT GTCGCAGGCG GTCGGCATCG CGCAGCCGAC GCTGTTTCTC CACTTCGGCA GCAAGAGCCA CGTCCTCGTC GCGCTGATCG ACACCATCCA GGAGCGCCTG CAGCAGGAAA TGGCGGGCCT CGGCCTTGCC CGGCTGCCGC CGCTCGAGCG CTTGAAGGCC GTGATCCGCG CGCACCTCAA TTTCATCCAG CGCCAGCCCG GGATCCCGCG CCTGCTGTTC TCGGAGGAAC TGCAAAGCGG CGATCCGGTG TTTCGCGCGC GCATGAACGG TCTCGTGCAG TTCTTTCTCG GCTTCATCGC CGACCTGATC GCCGCCGCGC AGGCCGAAGG CGAGATCCGG CCCGAAATCG TTCCGCAGCA GAACGCCTGC ATCCTGATCG CGGCCGTTCA GGGGCTCGCA TTTCGCTGGG TGCTTTCGGA CAATCGCTTC GAACTGAGCG AGCAGGCCGA CGCCGTCATC GCGACCTTCA TCGACGGCTG GGCCGCGCGC CCCTAG
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Protein sequence | MEIIRHEGVA KLTTRSLSQA VGIAQPTLFL HFGSKSHVLV ALIDTIQERL QQEMAGLGLA RLPPLERLKA VIRAHLNFIQ RQPGIPRLLF SEELQSGDPV FRARMNGLVQ FFLGFIADLI AAAQAEGEIR PEIVPQQNAC ILIAAVQGLA FRWVLSDNRF ELSEQADAVI ATFIDGWAAR P
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