Gene Tbd_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2169 
Symbol 
ID3671950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2254052 
End bp2254798 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID637710873 
Producthypothetical protein 
Protein accessionYP_315927 
Protein GI74318187 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0210043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCT TCAAGGACCA TTTCTCGTCG GGGTCCGAAG GCTACGCGGC ATACCGGCCC 
GACTATCCCG CCACGCTCTT CGCCTGGCTC TCTAGCCTCT GTGCGGAACG CCGCCTCGCC
TGGGACTGCG CGACCGGAAG CGGCCAGGCC GCACGCGGGC TCGCGGCGCA TTTCCCACGT
GTCGTCGCGA GCGACGCATC GGCCGAGCAG GTCCGTCACG CCACGCCGCA TCCAGGGGTC
GATTACCGAG TCGCGACCGC GGAGGCGAGC GGGCTCGCCG AGCGCAGCGT CGACCTCGTC
ACGGTCGCAC AGGCCGCGCA CTGGTTCGAT CTGCCGCGCT TTTACGCCGA GGTCGCGCGC
GTGCTGAAGC CCGCCGGCGT CGCGGCGCTC TGGGGCTACG GCCGCATCGT GCTGCCGGGT
GCGATGGACG CGCCGCTGCG GTATTTCTAC GCCGAGACGG TCGGTCCCTA CTGGCCCGCG
GAACGGGCGC TGATCGACGA CGCCTACCGC GGCCTCGATT TTCCGTTTGT CGAAATCCCG
CCGCCAGCGT TCGCGATCGA AGTCGCGTGG ACGCTCCCGC GGCTCATCGA CTATCTCTCG
ACCTGGTCCG CCGTGAAGCG CTTCCAGACC GCGCGGGGAC GCGACCCCTT GCCGGCGCTG
AACGCCGAAC TCGCGCCGCT GTGGGGCGAT GCGAACGCGG CCATGACCTT GCGCTGGCCG
CTGTTCCTGC GCGTCGGACG GGTCTAG
 
Protein sequence
MTGFKDHFSS GSEGYAAYRP DYPATLFAWL SSLCAERRLA WDCATGSGQA ARGLAAHFPR 
VVASDASAEQ VRHATPHPGV DYRVATAEAS GLAERSVDLV TVAQAAHWFD LPRFYAEVAR
VLKPAGVAAL WGYGRIVLPG AMDAPLRYFY AETVGPYWPA ERALIDDAYR GLDFPFVEIP
PPAFAIEVAW TLPRLIDYLS TWSAVKRFQT ARGRDPLPAL NAELAPLWGD ANAAMTLRWP
LFLRVGRV