| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2168 |
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| Symbol | |
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| ID | 3671949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2252976 |
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| End bp | 2254055 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637710872 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_315926 |
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| Protein GI | 74318186 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.907058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.02176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTA CCGCCGCCGA TTCCCGTTTC ATGTCGCGCG CCCTGCAACT CGCGGCGCGC
GGGCTTTTCA CGACGAGCCC CAATCCGCGC GTCGGCTGCG TCCTCGTCAA GGATGATCGC
ATCGTCGGCG AAGGCTGGCA CGAACGCGCC GGCACGCCGC ACGCCGAAAT CCATGCCCTG
CGCGCCGCGG GCGAAGCCGC GCGCGGCGCA ACGGCCTACG TCACGCTCGA GCCCTGCTCG
CACCATGGCC GCACGCCGCC CTGCGCGGAG GCGCTCATCG ACGCCGGCGT CAGCCGCGTC
GTCGCGGCGA TGACCGATCC CAACCCGCTG GTCGCCGGCG GTGGCATTTC GATGCTGACG
CTCGCGGGGA TCGCGGCCGA GGTCGGGTTG ATGGAGGCCG AGGCGCGCGC GCTCAATCCC
GGCTTCGTTT CGCGCATGAC GCGGCGCCGT CCCTGGGTGC GGCTCAAGAC CGCGTCGACG
CTGGACGGCA AGACCGCGCT CGCCAACGGC GCCTCGCAGT GGATCACCGG CGAGGCCGCA
CGCGCCGACG TCCAAAGACT GCGCGCGCGC GCCTGCGCAA TCCTGACCGG CAGCGGCACG
GTGCTCGCCG ACGATCCGCG CATGAACGTG CGTGACTTCG ACATCGGCCG GGCGCCGCTA
CGCGTCGTCG TCGATTCGAC CCTGCGCACG CCGGCCAGCG CGGCGATCCT GCCCGCGCTC
GTCGCCTGCC GCGACGCCTC GCCGGCTACG CGGACGGCGC TCGAAGCGGC GGGGGCGGAG
GTGATCGAGA TGCCGGGCGT AGATGGCCGC GTCGACCTCG CCGCGCTGCT CGCGCTCCTC
GCGCAGCGCG GCGTCAACGA AGTCCACGTC GAAGCCGGTG CGGCGCTGAA CGGCGCGCTG
CTCGCGGCCG GCTTGGTCGA CGAGTGGGTC GCCTACCTCG CGCCGCTCGC GGTCGGCGAT
GACGCGCGCG GGCTGTTCGC CCACGCGCCG CTCGCCACGC TCGCCGAGGC CGCGCGTTTC
CGGTTGCAAG ACCTGCGGCA GATCGGCGGC GACCTGCGCC TGACCCTGCT GCCGGCATGA
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| Protein sequence | MRFTAADSRF MSRALQLAAR GLFTTSPNPR VGCVLVKDDR IVGEGWHERA GTPHAEIHAL
RAAGEAARGA TAYVTLEPCS HHGRTPPCAE ALIDAGVSRV VAAMTDPNPL VAGGGISMLT
LAGIAAEVGL MEAEARALNP GFVSRMTRRR PWVRLKTAST LDGKTALANG ASQWITGEAA
RADVQRLRAR ACAILTGSGT VLADDPRMNV RDFDIGRAPL RVVVDSTLRT PASAAILPAL
VACRDASPAT RTALEAAGAE VIEMPGVDGR VDLAALLALL AQRGVNEVHV EAGAALNGAL
LAAGLVDEWV AYLAPLAVGD DARGLFAHAP LATLAEAARF RLQDLRQIGG DLRLTLLPA
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