Gene Tbd_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2158 
Symbol 
ID3671939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2243785 
End bp2244579 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID637710862 
Producthypothetical protein 
Protein accessionYP_315916 
Protein GI74318176 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.73728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.123639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCATG CATGCAGAAA CCCCATTCGC GCGCGCATGG TCATCGCCAC CTTCCGCTTC 
TACGAAGAAC TGAACGATTT TCTCGCACCG GACCGCCGCA AGCGGGAATT CACCGTGCCC
TGCGCGCGGG CGGCGACGAC CAAACACATG ATCGAGGCGC TCGGGGTGCC GCACACCGAA
GTCGAGCTGA TCCTGGTCAA CGGCGAGTCG GCGGGTTTCG ACCGTCGTCT GCAGGATGGC
GACCGGGTCG CCGTCTATCC GCGCTTCGAG GCAATGGACG TCTCGCCGCT GCTGCGGGTC
CGCGAGCGTC CGTTGCGCGA GACGCGTTTC GTCGCCGACG CGCACCTCGG CGGGCTCGCC
CACATGCTGC GCATGCTCGG CTTCGATACG CTGTACGACA ATCATTTTCA CGACGACGCG
ATCGTTGCGA TCTGCGAACA CGACGGCCGC ATCGTGCTGA CGCGCGACCG CGAACTGCTC
AAGCGGCGCA GCGTCACCCA CGGCTGCTAC ATCCATGCGC TGAAATCCGA GGCCCAGTTG
CGCGAAGTCG TCGCGCGCCT CGATCTTGCG CGCAGTGCGC GGCCGTTCAC GCGCTGCCTG
CACTGCAACG TGCCGCTGCG CACGGTCGAC AAGGCGAGCG TGCTCGACCG CCTGCCGCCT
AAGGTGCGCG AGCACTACGC GCATTTTCCC ACCTGCGACA GCTGTGGCCG CATCTACTGG
GCGGGCTCCC ACTGGCGCAA CATGCGCCGC CTGCTCGACG ACGTGCTGAG CGGTGAACGG
GACAGCGGAA CTTAG
 
Protein sequence
MHHACRNPIR ARMVIATFRF YEELNDFLAP DRRKREFTVP CARAATTKHM IEALGVPHTE 
VELILVNGES AGFDRRLQDG DRVAVYPRFE AMDVSPLLRV RERPLRETRF VADAHLGGLA
HMLRMLGFDT LYDNHFHDDA IVAICEHDGR IVLTRDRELL KRRSVTHGCY IHALKSEAQL
REVVARLDLA RSARPFTRCL HCNVPLRTVD KASVLDRLPP KVREHYAHFP TCDSCGRIYW
AGSHWRNMRR LLDDVLSGER DSGT