Gene Tbd_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2153 
Symbol 
ID3671934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2239499 
End bp2241790 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content67% 
IMG OID637710857 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_315911 
Protein GI74318171 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.157967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG CACTTTTTTC CCACCGCAAG CACTGGGCCG CGCGCTTCGG CACCGCGCCC 
TTCCTGCCGA TGTCGCGCGC CGAGATGGCC GCGCTCGGCT GGGACGCCTG CGACGTGATT
CTCGTCGCCG GCGACGCCTA CATCGACCAC CCGAGCTTCG GCATGGCGCT GGTCGGCCGA
CTGCTCGAAG CCCAGGGCTA CCGTGTCGGC ATCATCAGCC AGCCCGACTG GCACTCGGCC
GACGCCTTCC GCGTGCTCGG CCAGCCGACG CTGTATTTCG GCGTCACGGC CGGCAACATG
GACTCGATGG TCAACCGCTA CACGTCGGAC CGCAAGATCC GCTCGGACGA CGCGTACACG
GCCAATGCCG AGCCGAACAA GCGGCCCGAC CGTGCCGTCA CGGTCTACGC GCAGCGCTGC
CGCGAAGCCT TCCCGGGTAC GCCGGTCATC ATCGGCTCGA TCGAGGCGAG CCTGCGCCGC
ATCGCGCACT ACGACTACTG GTCCGACACC GTACGTCGCT CGGTCCTGCC GGACTCCAAG
GCCGATCTGC TGATCTTCGG CAACGCCGAG CGGGCCTTGC TCGACATCTC GCATCGTCTC
GCCAAGGGCG AAAACATCGC CGACATCCGC GACGTGCGTG GGACCGGCTT CATGGTGGCG
CGCGACTGGA AACCGGACGA GGCATGGATC GAGGTCCTCT CGACCGAGCT CGACACGCCG
GGCGCGATCG ACGCCCACGT CGATCCCTAC GCGATGACAC CGGCCGGCCC CACCGCGCAG
ACACCCGAAG GCACCGCTTC AATCAAAACG GCGCCGGTGC GCATCGTGCC GAAGGCCGAG
CGCCTCGCTG CACGCCAGGA GTTGCGCGCG CGCACGGTCA TCCGTCTGCC CGACTACGAC
CAGGTCAGGA ACAATCCCGC GCTCTACGCG CACGCGTCGC GCGTATTCCA TCTTGAATCG
AACCCCGGCA ACGCGCGCGC GCTGCGTCAG GGCCACGGCG AGCGCGACGT CTGGCTCAAC
CCGCCGCCGA TTCCGCTGAC CACGCCCGAG ATGGACGCGG TCTACGACCT GCCCTACGCA
CGCGCGCCGC ATCCGAGCTA CGGCGACGCC AAGATCCCGG CGTGGGAGAT GATCCGCTTC
TCGATCAACA TCATGCGCGG CTGCTTCGGC GGCTGCACCT TCTGCTCGAT CACCGAACAC
GAGGGGCGCA TCATCCAGAG CCGTTCGGAA GATTCGGTGA TCCGCGAGAT CGAGGCGATC
CGCGACAAGA CGCCGGGCTT CACGGGCGTC ATTTCCGACC TCGGCGGACC GACCGCGAAC
ATGTACCGCA TGGCGTGCAA GTCCAAGCAG ATCGAGCAGT CCTGCCGCCG CCTGTCGTGC
GTGTTCCCGG ACATCTGCGA GAACATGACC ACCGACCACA CGCCGCTGAT CCAGATGTAT
CGGCGTGCGC GCGCGGTTCC CGGCATCAAG AAGATCCAGA TCAGCTCGGG CCTCCGATAC
GACCTCGCCG TGCGCTCGCC GGAATACGTC AAGGAACTGG TGCAGCACCA CGTCGGCGGC
TATCTCAAGA TCGCGCCCGA GCACACCGAA GCCGGCCCGC TGTCGAAGAT GATGAAGCCC
GGCATGGGCG CCTACGAGCG CTTCAAGGAC ATGTTCGAAG CCGCGTCGAA GGCGGTCGGC
AAGAAGCAGT ACCTGATCCC TTACTTCATC GCGGCGCACC CGGGAACGAC CGACGAGGAC
ATGCTGAACC TCGCGCTGTG GCTGAAGAAG CACGACTTCC GTCTCGATCA GGTGCAGACC
TTCCTGCCGA CGCCGATGGC GCTCGCGACG GCGATGTATC ACACCGAAAA GAACCCGCTG
AAAAAGGTGC TCGGCGGCAA GGCCGAGACC GTGCCGGTCG TGCGCCAGGG CCGTACGCGG
CGCCTGCACA AGGCCTTTCT GCGTTACCAC GATCCCGACA ACTGGCCGCT GCTGCGCCAG
GCGCTCAAGG ACATGGGGCG CGAAGACCTG ATCGGCAACG GCAAGAAACA CCTGATCCCG
CTCTACCAAC CTGCCGGCAC GGGCCGACAG CCCGAGGGCG CGCGCAGTCC CTGTGCGGCG
CGCGCGGCGT CGGGCCAAGC CCACGGATCG AAGGCCGGCG CCGGCAAGCC CGCGGCAAAC
AAGGCCGCTG CGGTCAACAC GAGCGCCAGC AAACCGAGCG CCGGCAAGCC CGCGCCCGCC
AGCCGCGGAC GGCCGCCGCA GGTGCCCAAG CATCCGCTGA GCCAGCGGCG CGGTGGCGGC
AAGTCGCGCT GA
 
Protein sequence
MTNALFSHRK HWAARFGTAP FLPMSRAEMA ALGWDACDVI LVAGDAYIDH PSFGMALVGR 
LLEAQGYRVG IISQPDWHSA DAFRVLGQPT LYFGVTAGNM DSMVNRYTSD RKIRSDDAYT
ANAEPNKRPD RAVTVYAQRC REAFPGTPVI IGSIEASLRR IAHYDYWSDT VRRSVLPDSK
ADLLIFGNAE RALLDISHRL AKGENIADIR DVRGTGFMVA RDWKPDEAWI EVLSTELDTP
GAIDAHVDPY AMTPAGPTAQ TPEGTASIKT APVRIVPKAE RLAARQELRA RTVIRLPDYD
QVRNNPALYA HASRVFHLES NPGNARALRQ GHGERDVWLN PPPIPLTTPE MDAVYDLPYA
RAPHPSYGDA KIPAWEMIRF SINIMRGCFG GCTFCSITEH EGRIIQSRSE DSVIREIEAI
RDKTPGFTGV ISDLGGPTAN MYRMACKSKQ IEQSCRRLSC VFPDICENMT TDHTPLIQMY
RRARAVPGIK KIQISSGLRY DLAVRSPEYV KELVQHHVGG YLKIAPEHTE AGPLSKMMKP
GMGAYERFKD MFEAASKAVG KKQYLIPYFI AAHPGTTDED MLNLALWLKK HDFRLDQVQT
FLPTPMALAT AMYHTEKNPL KKVLGGKAET VPVVRQGRTR RLHKAFLRYH DPDNWPLLRQ
ALKDMGREDL IGNGKKHLIP LYQPAGTGRQ PEGARSPCAA RAASGQAHGS KAGAGKPAAN
KAAAVNTSAS KPSAGKPAPA SRGRPPQVPK HPLSQRRGGG KSR