Gene Tbd_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2134 
Symbol 
ID3671915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp2220861 
End bp2221784 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID637710838 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_315892 
Protein GI74318152 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGG CCGACCGCGA CGGCGTCATA TGGTACGACG GCAAACTCGT ACCATGGCGC 
GACGCTACCA CCCACGTCCT CACCCATACC CTGCACTACG GCATGGGTGT CTTCGAGGGC 
GTGCGCGCCT ACAAGGCCGA ACAGGGCACG GCGATCTTCC GCCTGGACGA GCACACCAAG 
CGCCTCTTCA ACTCGGCGCA TATCCTCGGC ATGAAACTGC CTTTCGACGC GGCGACGCTT 
TCGGAAGCGC AGCGCATGGT CGTGCGCGAG AACAAGCTCG AGTCGGGCTA CCTGCGGCCG 
ATGGCGTTCT TCGGCTCGGA GGCGATGGGC ATTTCGGCGA AGAATCTTTC GGTGCACGTG 
ATCGTCGCCG CCTGGCCCTG GGGCACCTAC CTCGGCAAGG AGGCTCTCGA AAACGGAATC 
CGCGTGAAGA CGAGCTCGTT CACGCGTCAC CACTCCAACG TGACGATGTG CAAGGCCAAG 
GCCAACGGCA ACTACATGAA CTCGATCCTC GCGCACAAGG AAGCCGAGAT GGACGGCTAC 
GACGAGGCGC TGCTGCTCGA CGTCGACGGC TTCGTCTCCG AAGGCTCCGG CGAGAACATC 
TTCATCGTGC GCGACGGCAA GCTCTATACG CCCGACCCGA GCTCCGCGCT CGTCGGCCTC 
ACGCGTGACA CGATCATCCA GCTCGCCGAG GAAATCGGCC TCACGGTGAT CGAAAAGCGC 
ATCACGCGCG ACGAGGTCTA TATCGCGGAC GAGGCGTTCT TCACCGGCAC GGCTGCCGAA 
GTCACGCCGA TCCGCGAGCT GGACAACCGC ACGATCGGTT CCGGTAGCCG GGGCCCGGTC 
ACGGAACGCC TGCAATCGAT GTACTTCGAT TGCGTGCACG GCCGCGCAGC CAATCACCTC 
GACTGGCTCA CGCCGGTAGC GTAG
 
Protein sequence
MSMADRDGVI WYDGKLVPWR DATTHVLTHT LHYGMGVFEG VRAYKAEQGT AIFRLDEHTK 
RLFNSAHILG MKLPFDAATL SEAQRMVVRE NKLESGYLRP MAFFGSEAMG ISAKNLSVHV 
IVAAWPWGTY LGKEALENGI RVKTSSFTRH HSNVTMCKAK ANGNYMNSIL AHKEAEMDGY 
DEALLLDVDG FVSEGSGENI FIVRDGKLYT PDPSSALVGL TRDTIIQLAE EIGLTVIEKR 
ITRDEVYIAD EAFFTGTAAE VTPIRELDNR TIGSGSRGPV TERLQSMYFD CVHGRAANHL 
DWLTPVA