Gene Tbd_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2124 
Symbol 
ID3672896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2212503 
End bp2213150 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID637710827 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_315882 
Protein GI74318142 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATG ACATGGACCT CCTCGAACTG CTGAAGGCGG CGCTCGCGCT GTTCGCGATC 
GTCGATCCCG TCGGTGTCAT CCCGATCTTT CTGATGGCGA CGCACGGCTT CACGCTTACG
CAAAGTCGCG CGGCCGCGCG CATCGCGGCG CTGACGGTGC TTGGCGTGCT GACGATCTTC
GCGTTCGCCG GTGAAACGCT GCTGACCTTC TTCGGAATCC GGCTCGCGGC GTTCTCGGTC
GCCGGCGGTT TGCTGCTTCT TTTGCTGGCG CTGTCGATGG TCGAGGCGCA CGTCAGCCCG
CAGCGGCAGA CGCAGGACGA GGCCGTCGAG GCGGAAGAGA AAGACTCGGT CGGAGTCGTG
CCGCTTGGCG TCCCGCTTCT CGCCGGCCCT GGCGCGATCA CCCACGTCAT CGTCGCCGCC
GGCGCACTCG AGGGCCACAC GCTGCAGCGT GGCCTGCTGC TGCTACCGGT CGGGCTCGTC
GCGCTGTCGG TATGGCTCGC TTTCCGCGCC GCGCCCGTGA TCGCGAAGCG ACTCGGAAAA
ACCGGCATTC ACGTCGTCAC CCGCTTGATG GGTCTGATCA TCGCGGCGAT CTCGATCGAG
ATGATCGCCC GCGGTCTCGG TGAACTGTTT CCGGGCCTGC TAACCTGA
 
Protein sequence
MMHDMDLLEL LKAALALFAI VDPVGVIPIF LMATHGFTLT QSRAAARIAA LTVLGVLTIF 
AFAGETLLTF FGIRLAAFSV AGGLLLLLLA LSMVEAHVSP QRQTQDEAVE AEEKDSVGVV
PLGVPLLAGP GAITHVIVAA GALEGHTLQR GLLLLPVGLV ALSVWLAFRA APVIAKRLGK
TGIHVVTRLM GLIIAAISIE MIARGLGELF PGLLT