Gene Tbd_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2123 
Symbol 
ID3672895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2211484 
End bp2212392 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID637710826 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_315881 
Protein GI74318141 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG GCATCATCGG ACTCGGCCGC ATGGGCGGAA ACATGGCTCG GCGGCTCGGC 
CGCAAGGGCA TTCGCATCGC CCTCTACAAC CGCAGCCGCG ACGTGAGCGA TGCGATCGCG
GCAGAAGCCG GCCATCTCGC GTGCGGAACG CCCGAAGAGC TCGTCGCGGC GCTGCAGGCG
CCACGCATCG TCTGGCTCAT GCTGCCGGCA GGCAAGGCGA CCGAAGACGC CGTGTCCGCG
CTGCTGCCCC TGCTCGACGC GGGCGATCTT CTGGTCGACG GCGCCAATGC CTATTACAAG
GACGACCAGC GCCGCGCCGC GCTGCTCGCC GACAGACAGA TCGACTACGC GGACGCTGGC
GTGTCGGGCG GCGTGTGGGG GCTGGAAAAC GGCTACTGCA TCATGTTCGG CGGCTCCGAC
GTCGCGGCCG CGCGGCTCAA GCCGTACATG GAAGCGCTCG CTCCGTCGCC GACCACGGGC
TGGCTTCACA CGGGGCCGGT CGGATCGGGA CACTTCGTCA AGATGGTCCA CAACGGCATC
GAGTACGGAA TGATGCAGGC CTTCGCCGAA GGCTTCGCGC TCATGAAGAA CAAGCCGGGC
TTCGATCTCG ACGTCGGCGC GATCGCCGAA TTGTGGCGAC ACGGCAGCGT CGTGCGTTCG
TGGCTGCTCG ATCTTTCGGC GGATTTTCTC GCGCAGGATT CGACGCTCGA CGCGATCGAA
CCCTTCGTCG CCGACTCCGG AGAAGGCCGC TGGACCGCGC TCGAATCGAT CGAGCAGGGC
GTCCCGACGC CGGTCATGTC GCTCGCGCTC ATGATGCGTT TCGCCACCCA GGGCAAGAAC
GACTACGCGG CAAAGATGCT GGCAAAGATG CGGCAGGGTT TCGGCGGCCA CGCCGTGAAG
GAAGCTTGA
 
Protein sequence
MEFGIIGLGR MGGNMARRLG RKGIRIALYN RSRDVSDAIA AEAGHLACGT PEELVAALQA 
PRIVWLMLPA GKATEDAVSA LLPLLDAGDL LVDGANAYYK DDQRRAALLA DRQIDYADAG
VSGGVWGLEN GYCIMFGGSD VAAARLKPYM EALAPSPTTG WLHTGPVGSG HFVKMVHNGI
EYGMMQAFAE GFALMKNKPG FDLDVGAIAE LWRHGSVVRS WLLDLSADFL AQDSTLDAIE
PFVADSGEGR WTALESIEQG VPTPVMSLAL MMRFATQGKN DYAAKMLAKM RQGFGGHAVK
EA