Gene Tbd_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2094 
Symbol 
ID3672866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2185603 
End bp2186160 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID637710797 
Producthypothetical protein 
Protein accessionYP_315852 
Protein GI74318112 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC TCCACAGGTC CGATGCCTCC TCTCACGCCA ACCAGGACGA CAACGACGAG 
TCGCTGTTGT CCGCGCTGCT CGACGGCGAA AGCGGCCGCA CCGAGAGCGG GGCGTTTCTC
GCAGCGATGA GACAGGACGA GCGACTGCGA CGAACCTGGT CCGAATACCA CCTGATCGGC
GACCTCATGC GCGGCGTCGG CCCGGCGCCG GAGGGCTTCA TGGCGCGCTT TTCCGAGCGT
CTCGCCGCCG AGCCGACCGT GCTCGCGCCG CAACGCCACA TCTGGCCGCA GCGCGTCGTG
GTCGCATCGC TCGCGTCGCT CGCGGTGTGG GGGGCGGTGT CGCTGACCGG ACTCATGCCG
AGCCAGACGC CGGAAAGCGC GCCGATCGCG AGTGCGCCGG CGAACCCCGG ATTTCAGCAG
GCAACCCTGG TGGCACCGGT CGAATACGAT TCCGCGCAAT TCGCGCCCTA CGTCGTCGCG
CATCAGGAGT TCGCGCCGAG CGCAGTGGCG ACGCCGGTTT TTGAACCCGT CGTGGCAGTA
GGCATGGAGC CGCGCTGA
 
Protein sequence
MSALHRSDAS SHANQDDNDE SLLSALLDGE SGRTESGAFL AAMRQDERLR RTWSEYHLIG 
DLMRGVGPAP EGFMARFSER LAAEPTVLAP QRHIWPQRVV VASLASLAVW GAVSLTGLMP
SQTPESAPIA SAPANPGFQQ ATLVAPVEYD SAQFAPYVVA HQEFAPSAVA TPVFEPVVAV
GMEPR