Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2091 |
Symbol | |
ID | 3671993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2182805 |
End bp | 2184199 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710794 |
Product | peptidase S1C, Do |
Protein accession | YP_315849 |
Protein GI | 74318109 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGAG CGGCTCTGGC CATGACGAGC TTCGTGTTTG TGCTGGCGGC GCCGGTCGCG GAAGCGGTCG ACGTCGCCGA TCTGGTCGAA AAGCAGGGTC CGGCGGTGGT CAACATCAGC ACCACCAAGC TGGTCAAGCG CGGCGCCGAG GGCTTTCCGT TCGCGGTCCC GGAAGACCCC GAGATGCAGG AATTCTTTCG CCGCTTCTTT CCGGGCGTGC CGGGTCGGGC GCCCGGGGCA CCGGCGCAGG AGTTTCCGGC GCATGGCGCC GGCTCCGGCT TCATCGTTAG TAGCGACGGC TACATCCTGA CCAACGCCCA CGTCGTGAAA GGTGCGGACG AAGTCGTCGT CAAGCTGACC GACAAACGCA AGTTCATCGC CAAGGTCGTG GGTTCGGACC CGCGCACCGA CGTGGCCGTG ATCCGCATCA CGGCGCGCAA CCTGCCGGCG GTGCGCCTCG GCGACCCGGA AAAACTTCGC GTCGGTGAGG CAGTGGCTGC GATCGGCTCG CCTTTCGGCT TCGAGAACTC GGTCACCGCG GGCATCGTGT CGGCCAAGGG CCGCTCGCTG CCGTCCGAAA GCTACGTGCC CTTCATCCAG ACCGACGTCG CGGTTAACCC GGGTAATTCG GGGGGGCCGC TGTTCAACAT GCGCGGCGAA GTCGTCGGCA TCAACTCGCA GATCTACAGC CAGAGCGGCG GCTACCAGGG GGTGGCGTTC GCGATCCCGA TCGACATCGC GATGGAGGTC GTCGACCAGT TGAAGGCTGG CGGCAAGGTC TCGCGCGGCT GGCTTGGCGT CATGATCCAG GAGGTCAGCG CGGACCTCGC CGAATCCTTC GGCCTCGACC GGCCGCGCGG CGCGCTCGTG TCGCAGGTAC AGGATGGAAG CCCCGCGGCC CGTGCGGGCG TCCAGACCGC CGACGTGATC CTCAGCTTCA ACGGCAAGCC GGTCGAGAAT TCTGGCGACC TGCCGCGCAT CGTCGGCAGC ACCAAGCCCG GGTCGAAGAT CCCGATGCAG GTCTGGCGGC GCGGCAAAAT GCAGACCCTG CAGGTCGTCC TGGCCGAGCT GCCGAGCGAA GAGCAGGTCG CCGGCGCGGG CAAGAGCGGC AAGAGCTACT CGCGCGGCGG CCTCGCGCTG TCCGAACTCA ACCCCGAACA GCGGCGCGAG CTCAAGATCG ACCACGGCCT GCTCGTCGAG GAAGTCACCG GCGACGCCGC TCGGGCCGGC ATCCGGGTGG GGGACATCGT CCTCGCCGTC AACAATGCAA GGATCGCGAC CGTCGACGCG TTCCGCCAGG CGATCGCGGC GATCCCGAAA GGCAAGAGCG CTGCGCTCCT GGTGCGGCGC GGCGAAGGAT CGCTGTACAT CCCGCTGAAG ATTTCGGGTG AGTAA
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Protein sequence | MLRAALAMTS FVFVLAAPVA EAVDVADLVE KQGPAVVNIS TTKLVKRGAE GFPFAVPEDP EMQEFFRRFF PGVPGRAPGA PAQEFPAHGA GSGFIVSSDG YILTNAHVVK GADEVVVKLT DKRKFIAKVV GSDPRTDVAV IRITARNLPA VRLGDPEKLR VGEAVAAIGS PFGFENSVTA GIVSAKGRSL PSESYVPFIQ TDVAVNPGNS GGPLFNMRGE VVGINSQIYS QSGGYQGVAF AIPIDIAMEV VDQLKAGGKV SRGWLGVMIQ EVSADLAESF GLDRPRGALV SQVQDGSPAA RAGVQTADVI LSFNGKPVEN SGDLPRIVGS TKPGSKIPMQ VWRRGKMQTL QVVLAELPSE EQVAGAGKSG KSYSRGGLAL SELNPEQRRE LKIDHGLLVE EVTGDAARAG IRVGDIVLAV NNARIATVDA FRQAIAAIPK GKSAALLVRR GEGSLYIPLK ISGE
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