| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2060 |
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| Symbol | |
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| ID | 3672231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2150294 |
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| End bp | 2152018 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710762 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_315818 |
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| Protein GI | 74318078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.725097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.224311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA CGCTCAACGT CGTGCTGTGC TGGCACATGC ATCAGCCGTA TTACCGCGAA
GGGCTCTCCG GCGCCTATCA CCTGCCCTGG GTCTATCTGC ACGGGATCAA GGACTACAGC
GACATGGCTG CGCACCTCGA GCGCCATCCG AAGATGCGTG CCGTCGTGAA TTTTGCCCCG
GTCCTGCTCG AGCAGCTCGA CGACTACGCG CACCAGCTCG AACGTCTGCT GAAGCACGGA
ACGCCGACCC AGGACCGGAT GCTGAACCTG CTCGCCGGCG TCGAGCCCGT CCCGACCGAC
CTCGACGGCC GGCTGCGCGT GGTCCAGGAC TGTCAGCGCT GCCACGCACC ACGCATGATC
GACCCTTACC CGCCGTTCCG CGCCCTGCTC GACATGATCG GCGCGACCGA CGCCGGGGAC
GGCGCGGCGT CCGGCCTGCA CTGGCACCTC GGCTATCTCT CCGAGCAGTA TTTTCTCGAT
CTCTTGACCT GGTATCACCT CGCCTGGCTC GGGCATTCGC TGCGCGCGTT GCCGCTCGTG
CAGCGCCTGA TGGTCGAGGA AAGGGACTTC TCCGAAGCCG ACCGCCGCGA ACTCCTGCGC
CTGATCCAGC ACTGCATGGC CGGCCTGATT CCGCGCTACC GTGCGCTCGC GGAAAGAGGG
CAGGTCGAAC TGTCGATGAC GCCCTATGGG CACCCGATCC TGCCCTTGCT CAATGACTTC
GCCAACATGC GCGACGCGCT GCCAGACGCC CCCGCTCCCG AGGCAACGGC CTATCCGGGC
GGCGCCGAGC GCGCGCAGTG GCACCTGCAG CGCGGTATCG AGGTGTTCGA GCACTATTTC
GGCAGACGGC CTTCGGGCGT ATGGCTGTCG GAAGGCGGGG TGAGCGAGGA CGCGCTGGCG
CAGCTCGACG AATTCGGCTT CACCTGGACC GCGTCGGGGG AGGGCGTGTG GCGCCATAGT
TGCATCAAGT CGGGCGCGTC CGAAGAAGAC ATCCAGACCA AGCGCACGCT GTTCGCGCCG
GCGCAGGTCG ACGGCTTCAA GCCGCGCGTG TTTTTCCGCG ACGATGGCTT GTCGGATCTG
ATCGGTTTCA AGTACAGCGA CTGGCACGCC GACGATGCCA TCGGCGACTT CGTCCACCAT
CTCGAGAATA TCGCGACCTA CCTCGGCAAG GAGGCCAAGC ATCATGTCGT GTCGATCATT
CTCGACGGCG AAAACGCGTG GGAGTACTAC CCGGACAACG GCCACCATTT TCTCGAAGGG
CTCTATGGCG CGCTGTCGCG CCATCGCACG CTCGACGTCA GCACCTTCGC CGAGCAGGCC
GAAGCGGCCA CCAGCCAGCC GATGAAGCAG CTCGCCGCGG GCAGCTGGGT CTACGGCAGC
TTCTCGACCT GGATCGGCTC GGAGGACAAG AACCGCGGCT GGGACTATCT CGTGGCGGCG
AAGCGCGCCT ACGACCACGC GGTGATGAAC AACGATCTCG ACGCCGAGGC GCTCGCGCTG
GCGACGCGGC AACTCGCCGT GTGCGAAGGG TCGGACTGGT TCTGGTGGTT CGGCGACTAC
AACCCGGCGA GCAGCGTCAG CGACTTCGAA CAGCTCTACC GCACGCAGCT GCGCGAACTG
TATCGCCTGA TCGGGGTGGC GGCGCCGTCC GAACTCGACC AGACGTTGTC GACCGGCGGC
GGCTGGGCCG ACAACGCCGG CACCATGCGC CGCAACGTCG GCTGA
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| Protein sequence | MAKTLNVVLC WHMHQPYYRE GLSGAYHLPW VYLHGIKDYS DMAAHLERHP KMRAVVNFAP
VLLEQLDDYA HQLERLLKHG TPTQDRMLNL LAGVEPVPTD LDGRLRVVQD CQRCHAPRMI
DPYPPFRALL DMIGATDAGD GAASGLHWHL GYLSEQYFLD LLTWYHLAWL GHSLRALPLV
QRLMVEERDF SEADRRELLR LIQHCMAGLI PRYRALAERG QVELSMTPYG HPILPLLNDF
ANMRDALPDA PAPEATAYPG GAERAQWHLQ RGIEVFEHYF GRRPSGVWLS EGGVSEDALA
QLDEFGFTWT ASGEGVWRHS CIKSGASEED IQTKRTLFAP AQVDGFKPRV FFRDDGLSDL
IGFKYSDWHA DDAIGDFVHH LENIATYLGK EAKHHVVSII LDGENAWEYY PDNGHHFLEG
LYGALSRHRT LDVSTFAEQA EAATSQPMKQ LAAGSWVYGS FSTWIGSEDK NRGWDYLVAA
KRAYDHAVMN NDLDAEALAL ATRQLAVCEG SDWFWWFGDY NPASSVSDFE QLYRTQLREL
YRLIGVAAPS ELDQTLSTGG GWADNAGTMR RNVG
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