| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2058 |
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| Symbol | |
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| ID | 3672229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2146690 |
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| End bp | 2148912 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710760 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_315816 |
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| Protein GI | 74318076 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0222807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.370562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGC TAGTCGAGGC CACGCAGGCC GGCAGTGAAG CGTCCGTGGC GCTCGCGCCG
AGCGCGCCGA TCCAGCGTCT GCAGGCCGGC CTGCACCACG ATCCCTTCGA GGTGCTCGGC
GTGCACGTCC AGCCCGACGG CAGCAAGCTC GTCCGCGCCT TCCTGCCCGC CGCCGAGGCG
GTCGAAGTCG CCGGCGTGCG CATGACGCGC GTGCCCGGCA CCGATTGTTT CGAGCGTCTA
TTGCCGCCCG GGACGGCGCT CGAAGCGCAT CCGCTGCTGA CCTGGCAGGA CAAGCGCAGC
GGCGCCTGGC AGCGCCTGCG CTCGCCCTAC AGCTTCGCGC CGCAACTCGG CGAGATGGAT
TTGTATCTGT TCGGCGAGGG TCGCCATTTC GAGATCTGGA AGGTGCTCGG TGCGCGCGTG
AAGACCGTCG ACGGCGTCAC CGGCTGTCTG TTCGCGGTGT GGGCGCCGGC CGTGCTGCGC
GTCAGCGTCG TCGGCGACTT CAACGACTGG GACGGCCGGC GCCATCCGAT GCGCTGTCGC
GGCGTCTCGG GGGTCTGGGA GCTGTTCATC CCCGGGCTGG AGGCGGGGCA CGCCTACAAA
TACGAAATCC TCGGCCGCCA CGGCGAGCGC GTGACCAAGA CCGATCCCTA CGCGCGGCAG
ATGTTCCTGC GCCCCGAAAC GACCAGCCGC GTGCCCGACG AGCGCCCCTA CGCCTGGGGC
GACGCCGAGT GGCTTGCCGC GCGCACGCGC TTCGACTGGC AGCACCGGCC GATGAGCGTC
TACGAAGTCC ATCCCGGTTC GTGGCGCCGC CGCGCCGACG GCAGCTTCTA CAGCTGGCGC
GAACTCACGG CCGAGCTGAT TCCCTATGTG CGCGATCTGG GCTACACCCA CATCGAATTG
CTGCCGGTCG CCGAGCATCC GTTCGACGCC TCGTGGGGCT ACCAGGTCTC GGGTTACTAC
GCAGCGACGG CGCGCTTCGG CTCGCCCGAC GACCTGCGCG CCTTCGTCGA CGCGTGCCAC
CAGGCCGGGC TCGGCGTGCT GCTCGACTGG GTGCCGGGGC ATTTCCCCAA GGACGATTTC
GCGCTCGCCC GCTTCACCGG CGAGCCGCTC TATGAACATG CCGACCCGCG CCGCGGCGAG
CATCAGGACT GGGGCACGCT GGTCTTCGAT TTCGGCCGCA ATGAGGTGCG CAATTTCCTC
GTCGCCAATG CGCTCTACTG GCTCGAGGAG TTTCACATCG ACGGTCTCAG GGTCGATGCG
GTCGCGTCGA TGCTCTACCT CGACTATTCG CGGCGCCACG GCGAATGGCT GCCGAACCAG
CACGGCGGAC GCGAGAACCT CGAGGCGATC CATTTCCTGC ACGAGGTCAA CGCCGAGGTC
CACGCGCGTT TTCCGGGGGC GATCACGATC GCTGAGGAGT CGACGGCGTG GCCGGCGGTG
TCGCGGCCGA TCGAGCTCGG CGGCCTCGGC TTCTCGATGA AATGGAACAT GGGGTGGATG
AACGACACGC TCGACTACAT CGAGAAGGAG CCGGTCTACC GCAAGTATCA GCATAACCAG
CTGACCTTCA GCCAGATGTA CGCGTGGAGC GAGAATTTCG TGCTGCCGCT GTCGCACGAC
GAGGTCGTGC ACCTGAAGAA AAGCCTGCTC GACAAGATGC CGGGCGACCG CTGGCAGCGC
TTCGCCAATC TGCGTCTGCT CTACGCCTGG CAGTATGCGC ATCCGGGCAA GAAGCTGCTC
TTCATGGGCG GCGAATTCGG CCAGTGGAAC GAGTGGCGCG AAGCGGGACA GCTCGACTGG
GTCCTGCTCG GCTTTCCCGA GCACGACGGC ATCCGCGCGC TGCTGCGCGA CCTCAACCGG
CTCTACCGCG ACGAGGCGGC GCTGCACTTC TGGGATTTCG ACCCGCGCGG CTTCCGCTGG
ATCGACTGTC ACGACGCCGA CCAGTCGGTG CTGAGCCTCG TCCGCGAGGG ACCCGACGGC
GCGCCGCCGA TCGTCGTCCT GCTCAATTTC ACGCCGGTGC CGCGGCACGG CTATCGCATC
GGCGTGCCCC GCGCGGGCGC GTGGTGCGAG GTGCTGAACA GCGATTCGAT GTACTACGGC
GGCAGCAACC TCGGCAACGG CAAGCCCTTG TATCCCGCCG CCGTGCCTTG GATGGGCTTC
GGGCAGTCGA TCGAAGTGAC GCTGCCGCCG CTCGGGGCGA TTTTCCTCAA GCCCTGTCCC
TGA
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| Protein sequence | MRKLVEATQA GSEASVALAP SAPIQRLQAG LHHDPFEVLG VHVQPDGSKL VRAFLPAAEA
VEVAGVRMTR VPGTDCFERL LPPGTALEAH PLLTWQDKRS GAWQRLRSPY SFAPQLGEMD
LYLFGEGRHF EIWKVLGARV KTVDGVTGCL FAVWAPAVLR VSVVGDFNDW DGRRHPMRCR
GVSGVWELFI PGLEAGHAYK YEILGRHGER VTKTDPYARQ MFLRPETTSR VPDERPYAWG
DAEWLAARTR FDWQHRPMSV YEVHPGSWRR RADGSFYSWR ELTAELIPYV RDLGYTHIEL
LPVAEHPFDA SWGYQVSGYY AATARFGSPD DLRAFVDACH QAGLGVLLDW VPGHFPKDDF
ALARFTGEPL YEHADPRRGE HQDWGTLVFD FGRNEVRNFL VANALYWLEE FHIDGLRVDA
VASMLYLDYS RRHGEWLPNQ HGGRENLEAI HFLHEVNAEV HARFPGAITI AEESTAWPAV
SRPIELGGLG FSMKWNMGWM NDTLDYIEKE PVYRKYQHNQ LTFSQMYAWS ENFVLPLSHD
EVVHLKKSLL DKMPGDRWQR FANLRLLYAW QYAHPGKKLL FMGGEFGQWN EWREAGQLDW
VLLGFPEHDG IRALLRDLNR LYRDEAALHF WDFDPRGFRW IDCHDADQSV LSLVREGPDG
APPIVVLLNF TPVPRHGYRI GVPRAGAWCE VLNSDSMYYG GSNLGNGKPL YPAAVPWMGF
GQSIEVTLPP LGAIFLKPCP
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