| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2044 |
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| Symbol | |
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| ID | 3672215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2132166 |
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| End bp | 2134670 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637710746 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_315802 |
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| Protein GI | 74318062 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000418772 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.430312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCTT CTCCTTTACT CACGGACGCC CCGGTTTTTT CGGAGGGCTG CTTCCATTGC
GGCCTCCCGG TTCCCGCCGG TGCCCGCTAC CCGATCGAAT TCGAAGGCCA GACCAAGGAC
GCGTGCTGCC GCGGCTGTCA GGCGGTCGCG CAGACGATCA TCGACAGCGG CCAGAGCGCG
TACTACCACC ACCGCACGGC GCTGCCGGCA ACCGCGCGCG AAGCCGAGGC CGAACTCGCC
CAGCTCGGGC TCTACGACCT GCCCGAAATC CAGGAAAGCT TCGTGCGGGT GGAGGCCGAA
AACGTCCGCG AAGCCGCGCT GATCCTCGAA AACATCGTCT GCGCGGCGTG CATCTGGCTC
AACGAGCGCC ACATTGCAGC ACTGCCAGGC GTGCTCTCGG TCGAGATCAA CTATGCGACG
CGGCGCGCGC GCGTGCGCTG GGACAACAGC CGCATCCAGC TCTCGGCGAT CCTCAAGGCC
GTGTCCGACA TCGGCTACAT CGCCCACCCC TTCGACCCCG GCCGCTCCGA CGACCTCTAC
AAGCGCGAAC GCAACACCGC GATCAAGCGG CTCGCGATCG CCGGCCTCGG CATGATGCAG
GTCATGATGT ACGCCTTGCC GACCTACACG GCGACCGACA TGACCGAGGA CATCCGCCTC
CTGATGCGCT GGGCGAGCCT GGTCCTCACG ATTCCGGTCG TCGTCTATTC GGCCTGGCCC
TTCTTCATCG GCGCCTGGCG CGACCTCAAG CGCAGGGCGC TCGGCATGGA CGTGCCGGTC
GCGCTCGGCG TCGGCACGGC CTTCGTCGCC AGCGTCTACA GCACTTTCTC GAGCGAGGGC
GAGGTCTATT ACGACTCGGT CACGATGTTC ATCTTCCTGC TGCTGACCGG CCGCTTCCTC
GAAATGAACG CGCGCCGACG CGCCGGCGCC GCGGTCGAGG AACTGGTCAA GCTGATTCCG
GCAGCGACGA CGCGGCTGCC GGCCTGGCCG GCGCGTGACG AGGAGAAGGT GCCGGTGGCA
CGGCTCACGG TCGGCGACCA CGTACTGGTC CGTCCGGGCG AGACGCTGCC GGCCGACGGC
GTCGTCGTCG AGGGCGAGAG CGCCGTCAGC GAGGCGATGC TGACCGGCGA ATCGCAGCCG
ATCGCCAAGC GGGTCGACGC GAAGGTCGTC GGCGGCAGCC TCAACGAGGC GAGCCCGCTC
GTCGTGCGCG TCGAGAAGCT CGGCGCCGAC ACCCGGCTCG CGTCGATCGT CCGCCTGCTC
GACCGCGCGC AGAGCGAGAA GCCGCGCATC GGCCAGCTCG CCGACCGCGC CGCCGGCTGG
TTCGTCGGCC TCCTGCTCGT GATCACGGCG GCGGTCGGCC TCGCCTGGTA CGCGATCGAC
CCGTCGAAGG TGCTGTGGAT CGTGGTCTCG ATCCTCGTCG TCACCTGCCC CTGCGCGCTG
GGCCTCGCGA CCCCGGCCGC GCTCACCACC GCGACCGGCC GCCTGACGCG CCTCGGCCTG
CTGACGACGC GCGGCCATGC ACTCGAGACG CTGGCGCGCG CCACCGACCT CGTGCTCGAC
AAAACCGGCA CGCTGACCCA CGGCAGCCTG AGCGTCGCGC GCGTGGTCAC GCTGGGCCAC
CGCACCGAAG CCGAGGTGCG CGGGCTGGCG GCCGCGCTCG AGGCGGGCTC CGAGCATCCG
ATCTCGCGCG CGCTGCGTGA AGGCGCCGAC GCCGGGCTGC GCGCCGACGC GATCCGCAAC
ACGCCAGGGC GCGGCGTCGA GGGAACGGTC GCCGGGCGCG CCTACCGCCT CGGCTCTCCG
CGCTTCACCG CAGAGAGCGA CACGCCCCCG CGTCCGCCCG CCACCGACAC GGGCGAGCAC
CCTAACGGGC ATGAAAGCTG GGTCGCGCTG GCCGAAGACG GCGCGCTGAT CGCGTGGTTC
GCGCTCGCCG ACACCCCGCG CGCCGACGCG GCAACCGCGC TTGCGGCCTT GCAGGCACAG
GGCTTGCACC TGCATCTGGT GTCCGGCGAC GCCGAGCCCG CGGTGAAAGC CCTCGCGCAG
GCGCTCGGCA TCACCAGCTG GCGCGCCGGC GCGCTGCCCG AAGACAAGCT CGCCTACGTC
AAGGCCTTGC AGCAGCAGGG GCGCATCGTC GCCATGGTCG GCGACGGCAT CAACGACGCG
CCGGTGCTGG CCGGCGCCGA AATATCGATC GCGATGGGCG AAGGCGCGGA CGTCGCGCAG
GCCGCGGCCG ACATGGTGAT GCTCGGCAGC CGGCTGACGA CGCTGTCCGA AGGCGTCGCG
CTCGCCCGCA AGACGCAACG CATCATTCGC GAGAATCTCG GCTGGGCGCT GGGCTACAAC
CTGATCGCGA TTCCCGCGGC CGCACTCGGC TACGTCACAC CGTGGATCGC CGGCATCGGC
ATGTCGGCAA GCTCGCTGCT CGTCGTGTTG AACGCCTTGC GGCTGTCGGA CTTCAAGCAG
TCGACCGCGG ACGCCCCGCG CGCCGCCGAA GCTGCACTAC GCTGA
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| Protein sequence | MSSSPLLTDA PVFSEGCFHC GLPVPAGARY PIEFEGQTKD ACCRGCQAVA QTIIDSGQSA
YYHHRTALPA TAREAEAELA QLGLYDLPEI QESFVRVEAE NVREAALILE NIVCAACIWL
NERHIAALPG VLSVEINYAT RRARVRWDNS RIQLSAILKA VSDIGYIAHP FDPGRSDDLY
KRERNTAIKR LAIAGLGMMQ VMMYALPTYT ATDMTEDIRL LMRWASLVLT IPVVVYSAWP
FFIGAWRDLK RRALGMDVPV ALGVGTAFVA SVYSTFSSEG EVYYDSVTMF IFLLLTGRFL
EMNARRRAGA AVEELVKLIP AATTRLPAWP ARDEEKVPVA RLTVGDHVLV RPGETLPADG
VVVEGESAVS EAMLTGESQP IAKRVDAKVV GGSLNEASPL VVRVEKLGAD TRLASIVRLL
DRAQSEKPRI GQLADRAAGW FVGLLLVITA AVGLAWYAID PSKVLWIVVS ILVVTCPCAL
GLATPAALTT ATGRLTRLGL LTTRGHALET LARATDLVLD KTGTLTHGSL SVARVVTLGH
RTEAEVRGLA AALEAGSEHP ISRALREGAD AGLRADAIRN TPGRGVEGTV AGRAYRLGSP
RFTAESDTPP RPPATDTGEH PNGHESWVAL AEDGALIAWF ALADTPRADA ATALAALQAQ
GLHLHLVSGD AEPAVKALAQ ALGITSWRAG ALPEDKLAYV KALQQQGRIV AMVGDGINDA
PVLAGAEISI AMGEGADVAQ AAADMVMLGS RLTTLSEGVA LARKTQRIIR ENLGWALGYN
LIAIPAAALG YVTPWIAGIG MSASSLLVVL NALRLSDFKQ STADAPRAAE AALR
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