Gene Tbd_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2042 
Symbol 
ID3672213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2130337 
End bp2131059 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID637710744 
Productarginyl-tRNA-protein transferase 
Protein accessionYP_315800 
Protein GI74318060 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2935] Putative arginyl-tRNA:protein arginylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000226368 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.32871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA CCGAACCGCC TTTTCAGCGC ATCCAGTTCT ACCTGACCGC GCAATACGAC 
TGCAGTTACC TCCCGGGCCG GCTCGCCCGT TCGCAGGTCG CCACGCCGAC CCACCTGATC
GACCATCATG CCTACGGCGC GCTGATCCGC GCCGGCTTCC GGCGTAGCGG CCAGTTCACC
TACCGGCCCA ATTGCGAAGG CTGCCAGGCC TGCGTGCCTG TCCGTGTCGA CGTTTCGGGT
TTCGTTCCCA ATCGCACCCA GCGCCGCTGT CTCAAGCGTA ATCGCGGGCT CGCCGCGCGC
TTCCTGCCGC TCGATTTCAA GGACGAGCAT TACGCGCTCT ACCGCGCCTA TCTCGGCAGC
CGCCATGCCG GCGGCGGCAT GGACCGCGAC GGCCCCGAGC AATACACCCA GTTCCTGCTG
TCGTCCAACG TCGATTCGGT GCTCGTCGAA TTCCGCGACG GCGACGCGGT GGTGATGGTC
GCGGTCATCG ACCAGGTCGA CGATGGCCTG TCGGCGGTCT ACACCTTTTT CGATCCGGCG
CGCGAGCAGG ACAGCCTCGG CGTCTACGGC GTGCTGTGGC AGATCGAACT CGCAAAGCGC
CTCGACCTGC CCTATCTCTA CCTCGGCTAC TGGATCGGCG AGAGCCGCAA GATGGCGTAC
AAGAAACAGT ATCCGCCGCT GCAGGGCTTG GTCGACGGCA GCTGGCAGGC CCTCGAGGCG
TGA
 
Protein sequence
MHPTEPPFQR IQFYLTAQYD CSYLPGRLAR SQVATPTHLI DHHAYGALIR AGFRRSGQFT 
YRPNCEGCQA CVPVRVDVSG FVPNRTQRRC LKRNRGLAAR FLPLDFKDEH YALYRAYLGS
RHAGGGMDRD GPEQYTQFLL SSNVDSVLVE FRDGDAVVMV AVIDQVDDGL SAVYTFFDPA
REQDSLGVYG VLWQIELAKR LDLPYLYLGY WIGESRKMAY KKQYPPLQGL VDGSWQALEA