Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2030 |
Symbol | |
ID | 3672201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2120397 |
End bp | 2122052 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637710732 |
Product | DNA repair protein RecN |
Protein accession | YP_315788 |
Protein GI | 74318048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGTCCC ACCTCTCCAT TCGCAATTAC CTGCTGGTCG AAGCGGTCGA ACTCGACTTC GGTCCCGGCC TGACCGTGCT CACCGGTGAA ACCGGCGCCG GCAAGTCGAT CCTGGTCGAC GCGCTGGCGC TGGCGCTGGG CGACCGCGCC GAAGGTGGGG TCGTCCGCCA GGGCGCGGCG CGTGCGGAAA TCGCCGCGGA ATTCAGCATC GCCGGCCTGC CTGAACTTGC GCGATGGCTC GACGCGGCGG GCGTGGCGGC CGACGACGAC GTTCTCATTC TGCGCCGTGT GATCGAGGCG AACGGCCGTT CGCGCGCCTT CATCAACGGG AGCGTATCGC CGCTGTCGCA ACTCAAGGAA GCGGCCGAGT TCCTGTTGGA CATTCACGGC CAGCACGCGC ACCACGCGCT GCTGCGCGCG CAGACCCAGC GCGACGTGCT CGACGCCTAC GCCGGCGCGC AGCAGCAGGC GGCCGCGGTC GGCGCCGCCT GGCACGCCTG GCAGGCGGCG CGGCAGCAGC GCCACGACGC CGCGGCGCAC GGGCAGGCGC GGCAGATCGA ACGCGAAGGC TTGCAACTCG CCGTCGAGGA GTTGTGCGCG CTCGGCGACG ATCTCGCGCG CTGGGACGAG ATCCAGGCGG AGCACGGACG CCTGGCGCAC GTCACGACGC TGCTCGAGGG TAGCCAGGCG CTGATCGGCG GCCTCGACGA GGACGAGTCG TCGATATCAG GCGTGCTCGC CGGCTTGAGC GGACGGCTGG CCGAGATGCG TGCGCTCGAC GAGAGCCTGG GCGACGTCGC CCAGCTGCTC GAAGCCGCGA GCGCCGACGT CGCGGAGGCC GCGCTCGATC TGCGCCGCTA CGCCGATACG CTGAGCCTCG ATCCGGAACG GCTTGCCGAG CTCGATCGCC GGCTCGCCGA CATGCACCGG CTCGCGCGCA AGCACCGCGT CCAGCCCGGC GCGCTCGCGC CCCTGCTTGA CCAGTTCATG GCGCGGCTCG CCGAACTCGG CGCCGACGAC GACGTCGAGG CATTGCAGGC GAAAGAAGAC ACGGCCTGGG CGCAGTACCG CGATCTGGCC GGAAAGCTCG GGCGCACGCG GCGCCGCGCG GCGGATGCCC TGGCGGGACA GGTCAGCGCG GCGATGGCGG AACTCGCGCT CGCGGGCGGG AGGCTCGAGA TTGCGCTCGT ACCGTCGAGC GAGCCGCGTG CGCACGGACT CGAGGACGTG CAGTTTCTCG TCGCCAGCCA CCCCGGCATC GCGTCTGGGC CGCTCGCCAA GGTCGCCTCG GGCGGCGAGC TTTCTCGCGT CAGCCTCGCG ATCCAGACCG CCCTGTCCGG GGTCGCCGGG GTGCCGACGG TGATCTTCGA CGAGGTCGAC GTCGGCATCG GCGGTAGCGT CGCCGAAGCG GTCGGGCGCC GCCTCGCCCG CCTCGGCGAA ACGCGCCAGG TGCTCGTCAT CACCCACCTG CCGCAAGTCG CCGCACGCGG CAGCCGGCAC CTGCGCGTCG CGAAGCAGGC CAAGGGCGGA TTCGTCTCGT CGAACATCGA GTCGCTCGAC GCGGCGGCGC GGGTCGAGGA AATCGCGCGC ATGCTCGGCG GCATCCGGAT CACGTCGACG ACGCGCCAGC ACGCTGCGGA GATGCTCGCG GGTTGA
|
Protein sequence | MLSHLSIRNY LLVEAVELDF GPGLTVLTGE TGAGKSILVD ALALALGDRA EGGVVRQGAA RAEIAAEFSI AGLPELARWL DAAGVAADDD VLILRRVIEA NGRSRAFING SVSPLSQLKE AAEFLLDIHG QHAHHALLRA QTQRDVLDAY AGAQQQAAAV GAAWHAWQAA RQQRHDAAAH GQARQIEREG LQLAVEELCA LGDDLARWDE IQAEHGRLAH VTTLLEGSQA LIGGLDEDES SISGVLAGLS GRLAEMRALD ESLGDVAQLL EAASADVAEA ALDLRRYADT LSLDPERLAE LDRRLADMHR LARKHRVQPG ALAPLLDQFM ARLAELGADD DVEALQAKED TAWAQYRDLA GKLGRTRRRA ADALAGQVSA AMAELALAGG RLEIALVPSS EPRAHGLEDV QFLVASHPGI ASGPLAKVAS GGELSRVSLA IQTALSGVAG VPTVIFDEVD VGIGGSVAEA VGRRLARLGE TRQVLVITHL PQVAARGSRH LRVAKQAKGG FVSSNIESLD AAARVEEIAR MLGGIRITST TRQHAAEMLA G
|
| |