| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1988 |
|---|
| Symbol | |
|---|
| ID | 3671740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2078862 |
|---|
| End bp | 2079488 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637710687 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_315746 |
|---|
| Protein GI | 74318006 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC CCATCATCGC CCGCGAGGGC TGGCTCGTTC TGCTGGCGGC GTTCGGCGCC
GCGCTGATCG CTACCTGGCT CATCGGCTGG TGGTCGGTGC CGTTCTGGAT CTGGGCGGTG
TTCGCCCTGC AGTTCTTCCG CGATCCCGCG CGCGTGCCGC CCGCCGACGC GGACGCCGTG
ATCTCGCCGG CCGATGGTCG TATCGTCTCG GTCGAGAAGG TGCGTGATCC TCACCTCGAA
CGCGACGCGC TCAAGATCAG CGTGTTCATG AACGTCTTCA ACGTCCATTC CAACAAGAGT
CCGGTCGACG GCGAGATCAA GGCGCGCTGG TATACCCCCG GCAGCTTCGT CAATGCCGAC
CTCGACAAGG CGTCGACTGA GAACGAGCGC AACGCGCTGT GGATCCAGAG CGAACGCGGC
GATGTCGTCG CCGTGCAGAT CGCTGGCCTG ATCGCGCGCC GCATCCTTTG TTACGTACGG
ACAGGCGACC GACTCCTGCG TGGCCAGCGC TACGGCTTCA TCCGCTTCGG CTCGCGGGTC
GACGTCTATC TTCCGACGAG CGCGCGCGCC GCGGTCTCGA TTGGTCAGAA AGTGACCGGC
GGGCGTACCA TACTCGCTCG CTTTTAG
|
|---|
| Protein sequence | MKNPIIAREG WLVLLAAFGA ALIATWLIGW WSVPFWIWAV FALQFFRDPA RVPPADADAV
ISPADGRIVS VEKVRDPHLE RDALKISVFM NVFNVHSNKS PVDGEIKARW YTPGSFVNAD
LDKASTENER NALWIQSERG DVVAVQIAGL IARRILCYVR TGDRLLRGQR YGFIRFGSRV
DVYLPTSARA AVSIGQKVTG GRTILARF
|
|---|
| |